Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0086 ATGAACAGCGACCCATCAGAGGAGAATGTTGAAACAGAAGGCATCTCTCCCAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGTTGGCTTACCAAAGTCTAGGAGTGGTTTATGGCGACCTCAGCACCTCCCCTCTATATGTTTACAAAACCACTTTCTCTGGGAAACTGAGCCTCCATGAGAATGATGAAGAGATTTATGGGGTTCTATCCTTCATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATACGTTTTCATTGTCATGTCAGCCGACGATAATGGCGAAGGGGGTACCTTTGCACTGTACTCTCTTCTCTGCAGGCACGCAAGATTATGCATTCTACCGAATCAAGAGCCGGTAGATGAAAAGCTATCGGCGTACGACATGAAGGGAATCCCAGAAACGAGGCCGAGTGCCACTCTGAAGTCCTTTTTTCAGCTTCATCCATCTTTTAGAAATTTTTTTTTGGTGTTTGTTCTCTTTGGAACCTGTATGGGTATTGGTGATGGAGTCCTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACAAAAGATCACTGGACTCCATGAGAATTATGTTGTTTTAATCTCGTGCGTCATCTTAGTTGGATTCTTCTCCCTTCAGCATCGTGGAACACACAAAGTCGCTTTCATGTTTGCTCCGATCATCACGGCATGGCTTGCCTGTATTAGCGTTATCGGAATGTACAATATCATCAAGTGGAATCCATGTATATATCATGCGCTCTCTCCAGTTTATATGCTGAAGTTTCTGAGAAGCACAGGCGTCGAAGGTTGGATTTCATTAGGCGGAGTCGTTCTCTCAATCACAGGTGTGGAGGCAATGTTTGCTGACTTAGGCCACTTCTCTTCGCTTTCAATCAAGTTTGCCTTTACATTTCTTGTATATCCCTCTTTGATTCTTGCTTATCTGGGTGAGGCTGCATTCCTATCTAAGCACCATGAAGATATTCAAAGGAGCTTCTACAAAGCAATACCTGAGGCTGCATTTTGGCCAGTGTTCGTCGTTGCCACTTTTGCCTCTGTTGTAGGAAGCCAGGCTGTGATATCAGCTACGTTCTCCCTCGTAAATCAATGTTGTGCTTTGAATTGCTTCCCCCATGTAAAAACTATGCACACTTCAAACAAGATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGCTAATGTGCCTCTGTTTAGCTGTGACAATTGGGTTGAGAGACACAAATATGATAGGCCATGCATATGGGCTGGCAGTCACAATCGTTATGTTTGTCACAACTTGCTTGATGTCACTTGTGATAATTCTGGTTTGGAAGCAGAGGTTGATCAATGCCATTGCATTTTTCATGTTTTTCGGGTCAATAGAACTACTCTACATCTCGGCGTCGATCAGCAAAGTTCATGAAGGCGGGTGGATTCCCATCGTTCTTTCTATGATCTTTATGTGTTCGATGTATGCATGGAACTATGGGACGATGAAGAAGCAAGAATACGATGACGAGAACAAAGTGTCGATGAATCAGATACTTTCTTCAGGGCCTAGCCTTGGCATAGTGCGTGTGCCCGGGATTGGACTCATATATACTAATTTGGTGACTGGGGTTCCTGCTGTTTTTGGTCACTTTGTGACCACTTTGCCTGCATTTCATCAAGTGCTTGTATTTGTTTGTATTAAATACGTTCAAGTTCCCCATATCAACGAAGAAGACCGTTTGGTCATTACAAGGGTCGGGCCGAAAGAATGCGACATGTTTCGGTGCATCGTGAGGTACGGTTACAAGGATTTGCTACAAGAAAACTACGATTTTGAGAACAGATTGGTGTTTGCTCTAGTGCATTATGTAGAAACAGAAGGTCACTTTTGGAAACCAATGACTCGCGTCCCTAGAGGGTGTGAAAATTCAGAGGAAGAGCCATGTGAATATGAACCATTGGAGCAGGCTTTTACAAGCTCAAATATGTTGCAGTCTTCTTGCAAATATCAGGTAACGGACACTGCAGTCGACGATCGGGAGAAGTCGATCCGTAATGAGGAAGTGATGCAGATATTGAGAGCAAAAGAATCGGGAATCACGTACATTTTCGGTCATTGCTCAGTCAAGGCAAAGAAATCATCATCCATTTTCAAGAAGCTGGCCATTGATATTGTGTATGCTTTTTTGAATCAGAATTGCAGAGCGCCTGAAGTTATTCTGAATGTGCCTCACACTTCTCTTTTTGAAGTTGGCATGGTTTATTATGTATAG 2280 43.03 MNSDPSEENVETEGISPKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPVDEKLSAYDMKGIPETRPSATLKSFFQLHPSFRNFFLVFVLFGTCMGIGDGVLTPAISVLSAVSGVKQKITGLHENYVVLISCVILVGFFSLQHRGTHKVAFMFAPIITAWLACISVIGMYNIIKWNPCIYHALSPVYMLKFLRSTGVEGWISLGGVVLSITGVEAMFADLGHFSSLSIKFAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAAFWPVFVVATFASVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNKIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTIVMFVTTCLMSLVIILVWKQRLINAIAFFMFFGSIELLYISASISKVHEGGWIPIVLSMIFMCSMYAWNYGTMKKQEYDDENKVSMNQILSSGPSLGIVRVPGIGLIYTNLVTGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHINEEDRLVITRVGPKECDMFRCIVRYGYKDLLQENYDFENRLVFALVHYVETEGHFWKPMTRVPRGCENSEEEPCEYEPLEQAFTSSNMLQSSCKYQVTDTAVDDREKSIRNEEVMQILRAKESGITYIFGHCSVKAKKSSSIFKKLAIDIVYAFLNQNCRAPEVILNVPHTSLFEVGMVYYV 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 999555 1005927 - MC03g0069 Mch3g0086 682989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0086 759 NCBIfam potassium uptake protein 31 759 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch3g0086 759 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 759 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch3g0086 759 Pfam K+ potassium transporter integral membrane domain 31 522 IPR053951 -
Mch3g0086 759 Pfam K+ potassium transporter C-terminal domain 533 757 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0086 Mch-Chr3:999555 Mch8g1338 Mch-Chr8:9828015 3.79E-294 dispersed
Mch3g0086 Mch-Chr3:999555 Mch8g0003 Mch-Chr8:16589 5.37E-286 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0086 K03549 - csv:101222845 1358.58