Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0098 ATGGCTGGTAAAGCTCAAATCCCTACCAAAAGCTCAGCGCTTATTTCCATGATTGCAGATGAGGATACTGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAACGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTTGACTCAAAGACAACTGTAAAACAAATTGAAGATGCATTTAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAATATGATCAGGTTTCTGGTAGATAGCTACAATAAGCCAATCCCTGCAATATTGGAGATCCCCTCCAAGGATCATCCATATGACCCCGCACACGATTCAATTCTTTCGCGAGTAAAGAACTTGTTTTCTGCTGAATCTGTGGCATCTGGGAGGCGTTAA 393 40.46 MAGKAQIPTKSSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSAESVASGRR 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1140371 1145747 + MC03g0080 Mch3g0098 683001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0098 130 SUPERFAMILY AtpF-like 15 118 IPR036906 GO:0034220(InterPro)
Mch3g0098 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220(InterPro)|GO:0046961(InterPro)
Mch3g0098 130 NCBIfam V-type ATPase subunit F 12 124 IPR005772 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Mch3g0098 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Mch3g0098 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220(InterPro)
Mch3g0098 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 126 - GO:0016020(PANTHER)
Mch3g0098 130 FunFam V-type proton ATPase subunit F 9 122 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0098 Mch-Chr3:1140371 Mch7g0475 Mch-Chr7:7223224 8.93E-54 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0098 K02151 - csv:101215239 247.669