Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch3g0122 | ATGGCGGACAATTTTCTCCTCCTCCTCCTCTCATCCTCCCTCCTCGCCTACTTCATTTGGTTCCATTTCCTCGCCCGGAGCCTCGCCGGCGGGCCCAGGCTGTGGCCGCTCGTCGGCAGCCTCCCGGCGCTGTTCGCCAACCGCCGCAGAATCCACGACTGGATCGCCGCCAACCTCCGCGCGACGGGCGGCGCCGCCACGTACCAGACGTGCACCGTGGCGGTCCCGTTTGTGGGCCGGAAGCAGGGGTTTTACACGGTCACGTGCCACCCGAGGAACATAGAGCACGTGCTGCGAACCCGGTTCGAGAACTACCCGAAAGGACCGGACTGGCAGGCCGCGTTCCACGACCTTCTGGGGCAGGGGATTTTCAACAGCGACGGGGAGATTTGGCTGATCCAGCGGAAGACGGCCGCGCTGGAGTTCACGACGAGGACGCTCCGGCAGGCGATGGACCGGTGGGTGAATCGGACGATCAGGACGCGGCTGTGGTGCATTTTGGACAAGGCGGCGGAGTATCGGACGGCGGTGGATCTGCAGGATCTGTTGCTCCGATTGACTTTCGATAACATCTGTGGGCTGACGTTTGGGAAAGATCCGGAAACGCTGTCGCCGGAGTTGGCCGGAAATCCGTTCGCCATGGCGTTTGATACCGCCACCGAGGCCACTCTCCAGCGCCTTCTCTACCCTGGTCTCTTATGGAGGTTGGAGAAACTTGTGGGGATTGGAAAGGAGAGGAAGCTGAAGAAGAGTCTTTCAGTGGTAGAAAATTACATGAACGATGCCATCGCCGCCCGGAAAGAATCTCCCTCCGACGACTTACTCTCACGCTTCATGAAGAAACGCGACGCCGACGGCAACCACTTCTCCACCGCCGTCCTCCACCGCATCGCCCTCAACTTCGTCCTCGCCGGCCGCGACACCTCCTCCGTCGCCCTCACCTGGTTCTTCTGGCTCCTCCTCAACCACCCCCACGTCGAGCACAAAATCCTCCGCGAGATCTCCACCGTCCTCCGCCGAACACGTGGCGCCGATCCAACCCTGTGGGCCCACGAGCCGTTGGGATTCGACGAGGCCGACAAGTTGGTCTATCTCAAGGCCGCCTTGGCCGAAACGCTGCGTTTGTACCCCTCCGTGCCGCAGGACTTCAAATACGTCGCCGCCGACGACGTGCTGCCGGACGGCACTTTTGTGCCGGCGGGGTCCACCGTCACGTACTCCATTTACTCAGTGGGCCGGATGAAGAGCATCTGGGGAGAGGATTGCTCGGAGTTTAAACCGGACCGGTGGCTCTCCCCGGCCGGCGACCGGTTCGAGCCGCCCAAGGACGCCTACAAGTTTGTGGCGTTTAATGCTGGACCGAGGACCTGTTTGGGGAAGGACTTGGCTTATTTGCAAATGAAATCCGTCGCCTCCGCCGTCCTCCTCCGGTACCGGCTGTCGCCGGTTCCCGGTCACCGGGTCGAGCAGAAGATGTCTCTCACTCTTTTCATGAAGAACGGGCTCCACGTTTACTTGCAGCCACGTAAGCTCTAG | 1536 | 61.39 | MADNFLLLLLSSSLLAYFIWFHFLARSLAGGPRLWPLVGSLPALFANRRRIHDWIAANLRATGGAATYQTCTVAVPFVGRKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILDKAAEYRTAVDLQDLLLRLTFDNICGLTFGKDPETLSPELAGNPFAMAFDTATEATLQRLLYPGLLWRLEKLVGIGKERKLKKSLSVVENYMNDAIAARKESPSDDLLSRFMKKRDADGNHFSTAVLHRIALNFVLAGRDTSSVALTWFFWLLLNHPHVEHKILREISTVLRRTRGADPTLWAHEPLGFDEADKLVYLKAALAETLRLYPSVPQDFKYVAADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCSEFKPDRWLSPAGDRFEPPKDAYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVEQKMSLTLFMKNGLHVYLQPRKL | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1501818 | 1504467 | - | MC03g0099 | Mch3g0122 | 683025 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch3g0122 | 511 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | SUPERFAMILY | Cytochrome P450 | 21 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | CDD | CYP86A | 71 | 502 | - | - | |
| Mch3g0122 | 511 | Pfam | Cytochrome P450 | 86 | 498 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | Gene3D | Cytochrome P450 | 29 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g0122 | 511 | PANTHER | CYTOCHROME P450 | 18 | 502 | - | - | |
| Mch3g0122 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch3g0122 | 511 | FunFam | Cytochrome P450 | 23 | 511 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g0122 | Mch-Chr3:1501818 | Mch6g2401 | Mch-Chr6:25922154 | 1.14E-238 | dispersed | |
| Mch3g0122 | Mch-Chr3:1501818 | Mch6g0068 | Mch-Chr6:397319 | 8.03E-108 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch3g0122 | K15401 | - | csv:101214516 | 905.205 |