Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0193 GAGGAAGAAGTTCCCATTCTGAGCACTGAAAATTGGCATGACATTAAGATGTCAATAGTTGCTAAGAGGAGGCCTTGTATTGGCATTCCCAATTCCACAGAGGTAAAAAGTTGCAGTTCTGGCTGTGCTTTTTCCAGGCAGGAAAACAGTAATTTGGAGTCATTGAAACGTTCAACTTCAGCTTTGAAGCTTTGTGGGTTGATATTCTTGTGTCTTATAGCTATGGTAGTAGAGATTATTGGTGGTTTGAGAGCCCACAGTCTTGCAGTTATGACAGATGCAGCTCACTTGCTGAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCCGTTTGGGCTTCGAGCTGGGAGGCGACGCCCCGACGCTCTTACGGATACAACCGTCTTGAAGTCTTGGGCGCCCTTGTGTCTGTACAGCTTATATGGCTGGTTTCTGGGTTCTTAATCTACGAGGCAATCGACCGGATTCTCAGCCAAAAGGCGAAGGTGGATGGATTGCTTATGTTTGTCATTGCAGCATTTGGGTTCATCCTTAACTTATTTATGGTCTTATGGCTTGACCATTCTCACTCTCACTCTTCTCATGGCCATTCTCACTTTTGTCATCATAATCATAATCATAATCTTCACTCTCATCAGAATCACTTGGATCATGACCATGAACATGACCATGAGAAGGAGGAGGTTTACACTCTAACTAAACAAGAGAACAATAGTTCGTCAATGTTGAACATAAATCTCCAAGGTGCTTACCTTCATGTCATCTCAGATATGATCCAATCCATTGGGGTGATGATTGCTGGAGTCATTCTCTGGCTCAAACCCGACTGGTTCATCGTCGATTTAATCTGCACCCTTGTGTTCTCTGTTCTTGCTTTAGCCACCACTTTCTCTATGCTGAGCCATATAACTGGCATACTGATGGAAGGAACTCCCAGGGAGGTCAATATCGAGAGCCTAGAGAACGACCTCAAGGACATAAAAGGAGTCCATGACTTGCACGACTTGCATATCTGGTCCATCACGGTCGGAAAAGTCGTGTTGTCTTGCCACGTCGTAGCCGAACCCGGAGTTTGTTCTAGGGAGCTAATTTCTAAGATTAGGCACCTCTGTGAAAAGAGATACCATGTATTTCATAGCACCATACAAGTTGAG 1155 44.5 EEEVPILSTENWHDIKMSIVAKRRPCIGIPNSTEVKSCSSGCAFSRQENSNLESLKRSTSALKLCGLIFLCLIAMVVEIIGGLRAHSLAVMTDAAHLLSDVAGFSVSLFAVWASSWEATPRRSYGYNRLEVLGALVSVQLIWLVSGFLIYEAIDRILSQKAKVDGLLMFVIAAFGFILNLFMVLWLDHSHSHSSHGHSHFCHHNHNHNLHSHQNHLDHDHEHDHEKEEVYTLTKQENNSSSMLNINLQGAYLHVISDMIQSIGVMIAGVILWLKPDWFIVDLICTLVFSVLALATTFSMLSHITGILMEGTPREVNIESLENDLKDIKGVHDLHDLHIWSITVGKVVLSCHVVAEPGVCSRELISKIRHLCEKRYHVFHSTIQVE 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2416673 2417827 - MC03g0141 Mch3g0193 683096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0193 385 SUPERFAMILY Cation efflux protein transmembrane domain-like 63 309 IPR027469 -
Mch3g0193 385 Gene3D Cation efflux protein transmembrane domain 63 307 IPR027469 -
Mch3g0193 385 NCBIfam cation diffusion facilitator family transporter 68 385 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch3g0193 385 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 36 385 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Mch3g0193 385 MobiDBLite consensus disorder prediction 211 230 - -
Mch3g0193 385 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 314 385 IPR036837 -
Mch3g0193 385 Pfam Cation efflux family 68 307 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0193 Mch-Chr3:2416673 Mch6g2372 Mch-Chr6:25595776 4.66E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0193 K14689 - csv:101215692 511.916