Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0195 ATGGCGGAGATTTGCTGTAAAGTAGTGATGAGCGAGAGCGAGGCGTCGTCGTCGTGCGAGCCGAGCTCGCGAGTGGCCAGGCGGCGGAGAATGGAGATCCGGAGGTGTAAATTTGTGGCCGGAGTTACTCCGTCGGATACCGATACTGTTGCCAAGCGACAGAAGCTGGAGAATCGCGCCACCGCGCTTTCTTCCAGGGACTGCGATAACGCAGTACACAGCTGTGCTTCCGAAGAAGAGGAGGAGACCGTCGGAAGATTCGTCGCCGAAGAACCGCCGGCCAAGGAGATGTCGAGGCAGCCCTCGGTTGTGTCCGCGACTCTTGCTCGGGAATCTCCCTGCGCTGACTCCGCCGGGGAGATTCCGAAGTTCGGATTCTCTTCGGTTTGCGGAAGGCGGAGAGATATGGAGGACGCCGTCGCCGTTCATCCATCGCTATCCTTCGCAGACAAGGAAGCCTCCAGTAAACTGCACTTCTTCGGTGTCTACGACGGCCATGGCTGCTCTCATGTGGCGATGAGGTGCAAGGAGCGGCTTCACGAGCTAGTGAAAGAGGAGTTGGAAGGGGAGGAGAAAGAAGAGGACGGCGCCACGGCGGGGTGGGACGGCGCTATGAAGAGAATCTTCTGGCGAATGGACAAAGAAGTCGTGGCGCGTAACAACGACGAAGTTGTGGTTGCGAACTGCAGATGCGAACTCCAGTCGCCGGACTGCGACGCCGTCGGATCTACCGCTGTCGTCGCAATCGTCACGCCGGATAAGATCATCGTCGCCAACTGCGGTGATTCGAGAGCCGTTCTCTGCCGCAGCGGGAAGGCGGTCCCTCTCTCCTCCGATCACAAGCCGGATCGCCCCGACGAGCTGAGCCGGATCGAAGAAGCCGGTGGCCGAGTCATCTACTGGGACGGGGCGAGAGTCCTCGGAGTTCTCGCCATGTCCAGAGCCATAGGCGATAATTATCTGAAGCCGTACGTGATATCGGAGCCGGAGGTGACGATAACAGATCGGACGGCGGAGGACGAGTGCCTGATTCTGGCGAGCGACGGGCTGTGGGACGTGGTGCCGAACGAGACGGCGTGCGGAGTAGCGAGCATGTGCCTCCGGGGGAAGGCGGAGGGGCGGTCGCCGGGGTCGCCGTCGACGGCGGCGGAAGGGGAGGAGGGGGAGATCGCCGACAAGGCCTGCAACGACGCGTCGATGCTGCTGACGAAGCTGGCGTTGGCCAGGCACAGTACGGACAACGTGAGCGTCGTGGTGGTGGACCTTAAGAGGGACACGTAG 1281 61.28 MAEICCKVVMSESEASSSCEPSSRVARRRRMEIRRCKFVAGVTPSDTDTVAKRQKLENRATALSSRDCDNAVHSCASEEEEETVGRFVAEEPPAKEMSRQPSVVSATLARESPCADSAGEIPKFGFSSVCGRRRDMEDAVAVHPSLSFADKEASSKLHFFGVYDGHGCSHVAMRCKERLHELVKEELEGEEKEEDGATAGWDGAMKRIFWRMDKEVVARNNDEVVVANCRCELQSPDCDAVGSTAVVAIVTPDKIIVANCGDSRAVLCRSGKAVPLSSDHKPDRPDELSRIEEAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTITDRTAEDECLILASDGLWDVVPNETACGVASMCLRGKAEGRSPGSPSTAAEGEEGEIADKACNDASMLLTKLALARHSTDNVSVVVVDLKRDT 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2450485 2453257 + MC03g0142 Mch3g0195 683098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0195 426 SUPERFAMILY PP2C-like 123 423 IPR036457 -
Mch3g0195 426 PANTHER PROTEIN PHOSPHATASE 83 421 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch3g0195 426 SMART PP2C_4 111 420 IPR001932 -
Mch3g0195 426 Coils Coil 173 193 - -
Mch3g0195 426 CDD PP2Cc 123 422 IPR001932 -
Mch3g0195 426 ProSitePatterns PPM-type phosphatase domain signature. 159 167 IPR000222 GO:0043169(InterPro)
Mch3g0195 426 ProSiteProfiles PPM-type phosphatase domain profile. 123 422 IPR001932 -
Mch3g0195 426 Pfam Protein phosphatase 2C 124 384 IPR001932 -
Mch3g0195 426 Gene3D - 118 426 IPR036457 -
Mch3g0195 426 MobiDBLite consensus disorder prediction 370 389 - -
Mch3g0195 426 FunFam Protein phosphatase 2C 37 118 426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0077 Mch-Chr10:433518 Mch3g0195 Mch-Chr3:2450485 7.30E-79 dispersed
Mch10g0212 Mch-Chr10:1298411 Mch3g0195 Mch-Chr3:2450485 5.75E-88 dispersed
Mch3g0195 Mch-Chr3:2450485 Mch4g2553 Mch-Chr4:26060666 6.57E-117 dispersed
Mch3g0195 Mch-Chr3:2450485 Mch6g0853 Mch-Chr6:5919257 3.74E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0195 K14497 - csv:101206871 622.854