Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0415 ATGGCAGACGTCGGTCACAACAACGCCGCAGCCGATTTTCCGGCTGTTCCTACCCATGGAGGCCAATACGTGCAGTACAACATCTTCGGGAATCCGTTCGAGATCACCTCCAAATATCGCCCCCCAATTATGCCTATAGGTCGTGGCGCCTACGGCATCGTCTGTTCGGTTTTGAATTCGGAGACCAACGAGATGGTTGCGGTGAAGAAGATTGCCAACGCGTTTGATAATCATATGGATGCGAAGCGAACGCTCCGTGAGATTAAGCTTCTTCGGCATTTGGATCACGAAAATGTAATAGGCATAAGAGATGTGATTCCTCCACCTTTACGGAGAGAATTTAATGATGTCTACATTGCCACTGAACTAATGGATACGGATCTTCACCAAATAATCCGCTCCAACCAAGGTTTATCAGAAGAGCACTGTCAGTATTTCCTTTATCAGATTCTCCGAGGATTGAAATACATTCATTCTGCAAATGTCATTCATCGAGACCTGAAACCGAGCAACTTATTGCTTAATGCCAACTGCGATCTTAAAATATGTGACTTTGGTCTTGCTCGTCCAACTGCGGAAAATGAATGCATGACAGAGTATGTTGTCACAAGATGGTATAGGGCACCTGAACTACTATTGAACTCTGATTACACAGCTGCCATAGATATATGGTCTGTTGGTTGCATCTTTCTGGAGCTTATGAATCGAAGGCCTTTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTACTGACTGAGCTTCTTGGCACACCATCCGAGTCGGATCTTGGTTTTATTCGGAATGAGGACTCGAGAAGATATCTTCGTCAGTTACCTCCACATCCTCGTCAGCCATTAGCGACAGTTTTTCCACATGTTCATCCTTTGGCGATTGATCTTGTGGATAAAATGTTGACGTTTAATCCAACAAATAGAATTACTGTTGAAGCAGCATTAGCACATCCCTACCTAGAAAGATTGCACGACATAGCCGATGAGCCAGTTTGCCCAGAGCCATTCTCGTTCGAGTTTGAGCAACAATTCATTGACGAGGAGCAAATGAAGGAGATGATTTACAGAGAGGCAGTGGCACTCAATCCAGAATATGCATGA 1116 44.71 MADVGHNNAAADFPAVPTHGGQYVQYNIFGNPFEITSKYRPPIMPIGRGAYGIVCSVLNSETNEMVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGIRDVIPPPLRREFNDVYIATELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTAENECMTEYVVTRWYRAPELLLNSDYTAAIDIWSVGCIFLELMNRRPLFPGRDHVHQMRLLTELLGTPSESDLGFIRNEDSRRYLRQLPPHPRQPLATVFPHVHPLAIDLVDKMLTFNPTNRITVEAALAHPYLERLHDIADEPVCPEPFSFEFEQQFIDEEQMKEMIYREAVALNPEYA 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7463936 7467745 - MC03g0254 Mch3g0415 683318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0415 371 SMART serkin_6 40 325 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0415 371 Pfam Protein kinase domain 45 325 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0415 371 ProSiteProfiles Protein kinase domain profile. 40 325 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0415 371 FunFam Mitogen-activated protein kinase 124 352 - -
Mch3g0415 371 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0415 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 33 362 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch3g0415 371 Gene3D Phosphorylase Kinase; domain 1 23 362 - -
Mch3g0415 371 SUPERFAMILY Protein kinase-like (PK-like) 45 332 IPR011009 -
Mch3g0415 371 Gene3D Transferase(Phosphotransferase) domain 1 124 352 - -
Mch3g0415 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g0415 371 FunFam Mitogen-activated protein kinase 25 134 - -
Mch3g0415 371 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0415 Mch-Chr3:7463936 Mch3g0431 Mch-Chr3:7742664 3.42E-187 dispersed
Mch3g0415 Mch-Chr3:7463936 Mch8g0123 Mch-Chr8:720477 6.55E-214 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77244 PF00069 Pkinase 7.80E-73 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0415 K20536 - csv:101202796 709.909