Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0441 ATGGGTTGCTTTCGCTGCACCGGTTCTTCCAGCAAGAAATCGGAGAAAATCGACCAGAAAAACCACAATAGAAAGATCGCTAAGCCTGAGGATCTAGCGGCTTCAGATAAAGCGAAAGTAGTTTCAAGTTTAGCAGTGAAGAAAGATTCTGATGTAAAGGTGGTCGTATCTAAAGATGACCAATTGGCTTTAGATGTAAAGAAATTGAATTTGAAAGATGAGGTTTCTGAGGATGGAGAAACCAAGGGCCGCGCCAAGACTTTTACGTTCGAGGAACTTGCAGCGGCGACGGGCAACTTCCGCTCGGATTGCTTCCTGGGTGAAGGAGGATTTGGCAAAGTTTACAAGGGGTACTTGGAGAAAGTTAACGAGGTTGTAGCAATCAAACAACTTGACCGCAATGGAGTTCAAGGAATTCGGGAGTTCGTTGTGGAAGTCTTGACTTTAAGTCTAGCTGATCACCCTAATCTTGTAAAACTCATTGGCTTTTGTGCTGAAGGGGATCAGAGGCTGTTGGTGTATGAATACATGCCATTGGGATCGTTGGAAAACCATTTACATGATCTTCGACCTGGTGCAAAAGTAATTGATTGGAATACAAGAATGAAAATAGCAGCTGGTGCAGCAAGGGGTTTGGAGTATTTGCACGAAAAGATGAAGCCCCCAGTTATATATCGTGATCTGAAATGCTCAAACATTTTGCTCGGTGAAGGATATCATTCAAAACTATCTGATTTCGGATTAGCTAAAGTAGGTCCCAGTGGGGATAAAACACATGTTTCAACCCGCGTTATGGGCACATATGGGTATTGTGCACCAGATTATGCAATGACAGGCCAGCTGACATTTAAATCAGATATTTACAGCTTTGGCGTTGTTTTATTGGAACTCATAACTGGCAGGAAAGCGATTGATCATTTAAAACCACATTCAGAGCAAAATCTCGTGGCTTGGGCGCGACCGCTGTTCAGAGACCGGAAGAAATTCTCACAAATGGTAGACCCGATGCTCCAAGGACAATATCCCGTGAGGGGACTATACCAATCTCTTGCCATAGCCGCAATGTGCGTTCAGGAGCAGCCAAACATGCGGCCAGTTATATCCGATGTCGTTACCGCTTTAAACTACCTAGCATCCCAGAAATATGACCCCCAAACCCAGCCAAACCAAAGCTCCCAAAGGAGACCATCCTCTCCTAAACCGAAACGGGACGACGATAAGAGGGAAACTTCAGACGACGGGTCTGAGAGAGAGTAA 1257 44.87 MGCFRCTGSSSKKSEKIDQKNHNRKIAKPEDLAASDKAKVVSSLAVKKDSDVKVVVSKDDQLALDVKKLNLKDEVSEDGETKGRAKTFTFEELAAATGNFRSDCFLGEGGFGKVYKGYLEKVNEVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPLGSLENHLHDLRPGAKVIDWNTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLGEGYHSKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHLKPHSEQNLVAWARPLFRDRKKFSQMVDPMLQGQYPVRGLYQSLAIAAMCVQEQPNMRPVISDVVTALNYLASQKYDPQTQPNQSSQRRPSSPKPKRDDDKRETSDDGSERE 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7952832 7957175 + MC03g0269 Mch3g0441 683344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0441 418 MobiDBLite consensus disorder prediction 1 29 - -
Mch3g0441 418 FunFam Serine/threonine-protein kinase PBS1 177 393 - -
Mch3g0441 418 Gene3D Phosphorylase Kinase; domain 1 69 176 - -
Mch3g0441 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g0441 418 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524(InterPro)
Mch3g0441 418 PANTHER OS07G0668900 PROTEIN 48 402 - -
Mch3g0441 418 MobiDBLite consensus disorder prediction 379 418 - -
Mch3g0441 418 Pfam Protein tyrosine and serine/threonine kinase 105 372 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g0441 418 CDD STKc_IRAK 106 375 - -
Mch3g0441 418 SMART serkin_6 100 377 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0441 418 Gene3D Transferase(Phosphotransferase) domain 1 177 398 - -
Mch3g0441 418 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0441 418 FunFam probable serine/threonine-protein kinase RLCKVII 72 176 - -
Mch3g0441 418 MobiDBLite consensus disorder prediction 379 396 - -
Mch3g0441 418 MobiDBLite consensus disorder prediction 397 418 - -
Mch3g0441 418 MobiDBLite consensus disorder prediction 11 29 - -
Mch3g0441 418 SUPERFAMILY Protein kinase-like (PK-like) 86 393 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0965 Mch-Chr2:6496007 Mch3g0441 Mch-Chr3:7952832 1.40E-179 dispersed
Mch3g0441 Mch-Chr3:7952832 Mch5g1795 Mch-Chr5:18360202 1.30E-175 dispersed
Mch3g0441 Mch-Chr3:7952832 Mch9g1622 Mch-Chr9:18385833 3.39E-181 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77246 PF07714 PK_Tyr_Ser-Thr 1.10E-43 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0441 - - - 0.0