Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g0514 | TTCGCTCTGGTTTTTCCTAACCCCACCTTTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTGAGTCTAAAATGGAGTGCAGTGAGGCAAAATCGAACACAACTTCAACAATCCTCCGTTCTCAGTCGCCGTCACCGTCGCCGCCGCCGCCGCCAAGTATTCCGGCGGGCGTTGTGGTCAGTCCCTGCGCGGCGTGCAAGATTCTGAGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTTTCAAGTTCACCATTGCTCATCGCGTCTTCGGTGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCCGAATCACAGAGGGCCGATGCAGTGAGCAGTTTGGTGTACGAAGCAAGTGCAAGAATCAGAGATCCAGTATATGGGTGTGCAGGAGCCATTTGCCAGCTCCAAAAACAGATAAACGAACTCCAAGCAGAGTTAGCCAAAACACAGGCAGAGCTTGTCAATATGCATTGCCACCAAGCCAGTTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACCCCGCCACCGGTGCCGCCGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAGAGCTACCAAAACTACACACCTTTCTTGGAGGATAGCAACATTTGGGAGCCTCTTTGGACATGA | 705 | 51.77 | FALVFPNPTFLSPLSLSLSLSLSLSLSLSTESKMECSEAKSNTTSTILRSQSPSPSPPPPPSIPAGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPPPDHRSLDNNFNIATPQSYQNYTPFLEDSNIWEPLWT | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9169524 | 9171297 | - | MC03g0309 | Mch3g0514 | 683417 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g0514 | 234 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 69 | 194 | - | - | |
Mch3g0514 | 234 | Coils | Coil | 150 | 177 | - | - | |
Mch3g0514 | 234 | Pfam | Lateral organ boundaries (LOB) domain | 71 | 168 | IPR004883 | - | |
Mch3g0514 | 234 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - | |
Mch3g0514 | 234 | ProSiteProfiles | LOB domain profile. | 70 | 171 | IPR004883 | - | |
Mch3g0514 | 234 | MobiDBLite | consensus disorder prediction | 37 | 62 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0380 | Mch-Chr2:2802266 | Mch3g0514 | Mch-Chr3:9169524 | 4.78E-66 | dispersed | |
Mch3g0514 | Mch-Chr3:9169524 | Mch9g1638 | Mch-Chr9:18513217 | 2.01E-60 | dispersed | |
Mch3g0514 | Mch-Chr3:9169524 | Mch9g1433 | Mch-Chr9:16724604 | 5.17E-48 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42994 | PF03195 | LOB | 5.70E-41 | No_clan | Mch | TF |
Pathway information
