Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0535 ATGATTGTATCAACAATAAACCAGTCTAAGGGCGGTATTGGGAGTGGCGAAATGTCAAGTTTTATCCGGCAAGTGGTGGTGGGGCGGTGGTTTTCCGTTTTCGCTTCGTTTCTGATAATGTCCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCCAAAGACATAAAATCGACGCTCCGATGTGACCAAACGACGCTCAACAAGATCGGCTTTTACAAAGACCTCGGATCCAACGTCGGCGTCATCGCCGGACTACTGGCGGAGGTGGTGCCGACTTGGTTCCTTCTACTCATCGGCGCCGCCTTCAACTTCCTCGGCTACTTCAAGATATGGCAAGGCGTCACCGGAAAAATCGTGCGCCCGACCGTCGGCTACTTTTGCTTTTACATTATGATCGGTGCAAACTCTATAAACTTCGCTAATACAGGAGTGTTGGTGACGTGCGTGAGGAACTTCCCAGAGAGAAGAGGGGTAATGTTGGGCCTACTGAAGGGCTTCGTGGGCCTAAGTGGGGCCATAATGACCCAACTCTACGTCGCCATTTACGGCCACGATACCAAATCTCTGATTCTGCTAATCGGCTGGTTCCCCTCTCTGCTCTCTCTGTTCTTCATCTACACAATCCGCGAACTGAGAGCCGAAAAACACCCAAACGAGTTCAGAGTTTTCGTCCAATTCCTCTGCGTCACCGTCATTTTAGCCGTCTTCCTCACCGTCTTGATCTTCATCCAGAAGCGCGTCCAGCTCGATCAATCAGCCCACATCGCAATCCTCGCCGCAATCTTCGCTCTGCTCTTCCTCCCCCTCCTGATCGCCATCAGAGAAGAATTGGTCCTCTGGAACCTCAAGAAAACCACCACCGGCAATTACTTCACCAGAATCAGAGTCGATCGGCCCGAGCCTCCCACCGCAACCACTTCATCGTCTTCCTCGGTCCAGACCCAGAGCAGCTCCTGCTTCGCCAACATTTTCAACAAGCCCGAGAGAGGCGAAGACTTCACCATCCTCCAAGCGATCTTGAGCGTCGACATGTTCATCCTCTTCATGTCGATGCTCGTCGGGGTCGGCTCGAGCCTGACCGCCATCGATAACCTCGGCCAGATCGGAGAATCCCTCGGCTACCCACACCAGACCATCAACTCCTTCATCTCCCTGGTCAGCATCTTCAACTTCACGGGCAGAATCTTCTCCGGGTTCGTCTCGGAAATCCTGCTCGAGAAGTACCAATTCCCGCGGCCGCTGATGCTGACGCTGATCCTCTTCGTGTCCTGCGTCGGCCATCTGGTAGTGGCGTTCCCGTTCGAGGACTCGCTCTACCTCGCCTCCGTCCTCATCGGGTTCTCCATGGGCTCCCAAGTGCCGCTCTACTTCGCGGTGATTTCGGAGATCTTCGGGCTGAAGCATTACTCGACGCTGTTCAATTTCGGGCAGCTGTCCTGCCCCGTCGGGTCGTACATTCTGAACGTGTTGGTGACCGGGAAGCTGTACGACGAGGTGGCGAAGACGGGGGTTGATCCGAAGGCGTTGCAGTGCCACGGGGTGCATTGTTTCCGGCAATCGTTTACGATTCTGGCGGCGCTGACGTTTGTTGTAGCGGTGCTGACGCTGGTTCTGGTGATGCGGACGAGCGAGTTCTACAGAGGGGATATATACAAGAAGTTCCGGGAGGATATGGACACGTTGAAGACGGAAGTTGAGTTCTATCGAGTTGACGAGAAGAGGACCAAGATTGGGAATTTGTTTGTTGACAAGCATACTATTAATTTCAAGAAG 1776 53.49 MIVSTINQSKGGIGSGEMSSFIRQVVVGRWFSVFASFLIMSGAGGVYLFAYYSKDIKSTLRCDQTTLNKIGFYKDLGSNVGVIAGLLAEVVPTWFLLLIGAAFNFLGYFKIWQGVTGKIVRPTVGYFCFYIMIGANSINFANTGVLVTCVRNFPERRGVMLGLLKGFVGLSGAIMTQLYVAIYGHDTKSLILLIGWFPSLLSLFFIYTIRELRAEKHPNEFRVFVQFLCVTVILAVFLTVLIFIQKRVQLDQSAHIAILAAIFALLFLPLLIAIREELVLWNLKKTTTGNYFTRIRVDRPEPPTATTSSSSSVQTQSSSCFANIFNKPERGEDFTILQAILSVDMFILFMSMLVGVGSSLTAIDNLGQIGESLGYPHQTINSFISLVSIFNFTGRIFSGFVSEILLEKYQFPRPLMLTLILFVSCVGHLVVAFPFEDSLYLASVLIGFSMGSQVPLYFAVISEIFGLKHYSTLFNFGQLSCPVGSYILNVLVTGKLYDEVAKTGVDPKALQCHGVHCFRQSFTILAALTFVVAVLTLVLVMRTSEFYRGDIYKKFREDMDTLKTEVEFYRVDEKRTKIGNLFVDKHTINFKK 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9481843 9484352 + MC03g0322 Mch3g0535 683438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0535 592 SUPERFAMILY MFS general substrate transporter 256 544 IPR036259 -
Mch3g0535 592 CDD MFS_Mch1p_like 28 530 - -
Mch3g0535 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 556 - GO:0016020(PANTHER)
Mch3g0535 592 SUPERFAMILY MFS general substrate transporter 53 270 IPR036259 -
Mch3g0535 592 Pfam Major Facilitator Superfamily 348 543 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Mch3g0535 592 Pfam Nodulin-like 29 274 IPR010658 -
Mch3g0535 592 Coils Coil 552 572 - -
Mch3g0535 592 Gene3D MFS general substrate transporter like domains 338 547 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0535 Mch-Chr3:9481843 Mch3g0550 Mch-Chr3:9648891 1.86E-213 dispersed
Mch3g0535 Mch-Chr3:9481843 Mch3g0539 Mch-Chr3:9535487 3.43E-186 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0535 - - - 0.0