Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0539 CGATTCACGAAACAAGTTGTAGAAGGGCGATGGTTTTCGGTGTTCGCTTCGTTCGTGATCATGATCGGCGCCGGCTCACCCTACCTATTCGGAACATACTCCAAAGTCATAAAGACCCAATTCGATTACAGCCAAACCCAAGTTAACACCTTGGGATTCTCCAAAGATCTCGGCTCCAACCTCGGAGTCTTCGCCGGACTTCTCGCCGAGGTGGCTCCGCCGTGGGTTCTGTTCATCGTCGGCTCCTCCCTCAACTTCTTCAGCTTCATCATGATTTGGCTCTCCGTCACTCACCGGATCGCCAAGCCCGAGTTCTGGCAGATGTTCCTCTACGTCGGCTTGGCTGCCAACGCACAAAACTTCGCCAACACTGCGGTTATGGTCATCAGCGTTAAAAACTTCCCGGACCGACGAGGGATTATTATTGGCCTTCTCAAGGGCTTCGTCGGCCTCGGAGGGGCCGTCTTGACTCAGATCTATCTAGCCATTTATGGCCACGAAGATCCATCTGATGTGCTTCTTCTGCTCTCATGGTTTCCGTCCGTTATATCCATTGTTCTTTTGTTTTCAATTAGAACAATCAGAGCTCGCAAACATCCGGAGGAGCTTAAAGTGTTTTACCACCTGCTGTACGCATCCATAATTCTAGCCATCTCTATCCTTATTATTACCTTGACCCAAAAACACATTGTTTTCTCCCATGCTGCCTATTTGGGAAGCGTCGCCGTGGTTGTGGCCTTACTGTGTCTGCCCCTTCTGATCGCCATTAAAGAAGAATTCTTGCTCTTCAAGCTCAACAACCAAGTCGTGGATCTATCCGTCACCCTTTCTATTGCCGAGGAGAAGGAATCTTTCCCGTACTCCAATGTTGTAGTGGAAGAAAATTCCCCTTCTAAGCCACAAAGAGGGGAAGATTTCACCATCTTGCAAGCTCTCCTCAGCAAAGACATGGCTCTCATTTTCTTGGCAACCGTTTGTGCATGTGGGTCGTCCATTGCAGCCATCGACAATCTAGGACAGATTGCAGAATCACTTTCCTATCCTGCTCAATCCATAAGCGTCTTCGTTTCTTGGATTTCCATATTCAATTTCTTCGGTCGGGTCTTCTCTGGCTTCATCTCCGAAACGCTAATGACCAAATACAAATTACCTCGTCCTCTCATGTTCGCCCTTGCCCATCTCCTCACCTGCATTGGCATACTCTTCATCGCCTTTCCATATCATGGTTCGGTCTACGTGGCTTCACTGATCATTGGGTTTGGGTTTGGAGCCCAAGTTCCTTTGTTATTCGCCATAATCTCTGATCTATTTGGCCTCAAGCACTACTCAACGCTGCTCAATTGTGGGCAACTGGCGGTGCCGCTTGGATCTTATGTCCTAAATGTGCTTCTAATAGGTAGGATGTATGATATGGAAGCCACTAGAACTGGAAATACCAAGAACGGTAAGGGGCTCACTTGCAGTGGAGCTCATTGCTTCAACGGCTCTTTCACAATTTTGGCAACAATAACATTGTTTGGAGCAATAAGTTCACTCGCATTGGCTTATAGAACTCGAGGCTTTTACAAAGGCGCCATATATCAGAGATACAGAGATGACATGTGGATTACCCAATCCGATATGGAATTATAT 1632 47.43 RFTKQVVEGRWFSVFASFVIMIGAGSPYLFGTYSKVIKTQFDYSQTQVNTLGFSKDLGSNLGVFAGLLAEVAPPWVLFIVGSSLNFFSFIMIWLSVTHRIAKPEFWQMFLYVGLAANAQNFANTAVMVISVKNFPDRRGIIIGLLKGFVGLGGAVLTQIYLAIYGHEDPSDVLLLLSWFPSVISIVLLFSIRTIRARKHPEELKVFYHLLYASIILAISILIITLTQKHIVFSHAAYLGSVAVVVALLCLPLLIAIKEEFLLFKLNNQVVDLSVTLSIAEEKESFPYSNVVVEENSPSKPQRGEDFTILQALLSKDMALIFLATVCACGSSIAAIDNLGQIAESLSYPAQSISVFVSWISIFNFFGRVFSGFISETLMTKYKLPRPLMFALAHLLTCIGILFIAFPYHGSVYVASLIIGFGFGAQVPLLFAIISDLFGLKHYSTLLNCGQLAVPLGSYVLNVLLIGRMYDMEATRTGNTKNGKGLTCSGAHCFNGSFTILATITLFGAISSLALAYRTRGFYKGAIYQRYRDDMWITQSDMELY 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9535487 9537118 - MC03g0323 Mch3g0539 683442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0539 544 Gene3D MFS general substrate transporter like domains 8 206 IPR036259 -
Mch3g0539 544 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 529 - GO:0016020(PANTHER)
Mch3g0539 544 Pfam Nodulin-like 10 256 IPR010658 -
Mch3g0539 544 SUPERFAMILY MFS general substrate transporter 11 520 IPR036259 -
Mch3g0539 544 CDD MFS_Mch1p_like 9 508 - -
Mch3g0539 544 Gene3D MFS general substrate transporter like domains 282 509 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0539 Mch-Chr3:9535487 Mch3g0544 Mch-Chr3:9605659 0 dispersed
Mch3g0535 Mch-Chr3:9481843 Mch3g0539 Mch-Chr3:9535487 3.43E-186 proximal
Mch3g0539 Mch-Chr3:9535487 Mch3g0542 Mch-Chr3:9570674 8.27E-287 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0539 - - - 0.0