Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0543 ATGGCCAACGACGGAGCCGCCGAAGCATGGATTTTTATCAGACAAGTTGCGCGGGGACGGTGGTTCTCGGTGTTCGCGTCCTTCATGATCATGATCGGCGCCGGCTCAACTTACATGTTCGGGACTTACTCCAAAGCCATAAAGACCGAATTCAATTACAGCCAAACCGAAGTTAACACATTGGGATTCGCCAAGGACCTCGGCTCGAACGTCGGAGTTTTCGCCGGTCTTCTCGCCGAGGTGGCTCCGCTGTGGGTCCTCTTCATCGTCGGCTCAGCCCTCAACTTCTTCAGCTACTTCATGATTTGGCTCTCCGTCACCCGCCGCATTGCCAAGCCCGAATTCTGGCACATGTTCATCTACATTTGCTTGGCTACCAACTCACAGAATTTCGCCAACACCGCGGTTTTGGTCACCAGCGTCAGAAACTTCCCCGACCGAAGAGGGATCATTCTGGGGCTTCTCAAGGGCTTCGTTGGCATCGGAGGAGCCATCTTGACCCAGTTGTATTTAGCCGTGTACGGCCATGAAGACCCATCGAATCTTATTCTCCTTCTTTCGTGGTTCCCCTCATTCATATCTCTTTTGCTTTTGCTCGCAATTCGACCAATCAAAATCCGCAAACATCCCGATGAGCTAAAAGTGCTTTACCACTTGCTTTACGTCTCCATACTTCTGGCTTTGTTTATCTTGTTCTTGACCTTAATGCAAAAACAAGTGGTTTTCTCTCACACTGGATATGCGAGTGGCGCTTTCGCCATTTTGGCCTTGTTGGCTCTCCCCCTTTTGATCACTGTTAGAGAAGAGCTCATGCTCTACAAACTCAACAAACAAAACAATGACCCATCCGTCATCGTTTCCATCGTTGGCGAGCAGAAGCTCCCGATGGTAACCGTGCCCCAGAACACGCCGCCGACGTCCACGCTGCAAGAAATTACCGAAATCTCGCCGTCCTGCCTCGAAAACATATGCAACAAGCCTGAAAGAGGGGAGGATTTCACCATCTTGCAAGCCATCTTCAGCGTAGACATGGCTCTTGTCTATCTCGCCACCTTTACTGGCTGTGGCTCCTCCCTTGCTTCCATTGACAACATAGGCCAAATTGGTGAGTCTCTTCACTACCCAACTCAATCCATAGCCATTTTCGTCTCTTGGGTTTCCGTTTTCAATTTCTTCGGCCGCGTCTTCTCCGGCTTCATCTCCGAAACCCTCATGACCAAATACAAATTACCTCGCCCTCTCATGTTTGCTTTTTCCTTTCTCCTCACTTGCATCGGCCAGCTCTTCATCGCCTTCCCATCTCCTGGCTCGGTCTACGTCGCTTCCTTGATCATTGGGTTCGGGTTCGGAGCCCAAGTTCCCCTGTTGTTCGCCATAATCTCCGAGCTCTTTGGTCTCAAACGCTACTCAACGCTCTTTAACTGTGGACAACTGGTGGTCCCGTTTGGATCCTATATACTAAACGTGGATATAGTGGGGAAGTTGTACGATATTGAAGCCATAAAAGAAGGTAGTAAGAAGACTGGCAAGGGGCTAACTTGCACCGGGGCTCATTGCTTCGGCTGGTCTTTCACAATTTTGGCATCAGTGACATTGTTTGGAGCTCTAGTTGCGCTTGTGCTGGCTTATAGGACTCGAGAGTTTTACAAAGGCGACGTATATAAGAAATACAGAGAGGACATGTGGATTCCACAATCGGAAATGGAATTCTATAGGTTAGATAACAAGAAGAACATTGATGAT 1743 49.17 MANDGAAEAWIFIRQVARGRWFSVFASFMIMIGAGSTYMFGTYSKAIKTEFNYSQTEVNTLGFAKDLGSNVGVFAGLLAEVAPLWVLFIVGSALNFFSYFMIWLSVTRRIAKPEFWHMFIYICLATNSQNFANTAVLVTSVRNFPDRRGIILGLLKGFVGIGGAILTQLYLAVYGHEDPSNLILLLSWFPSFISLLLLLAIRPIKIRKHPDELKVLYHLLYVSILLALFILFLTLMQKQVVFSHTGYASGAFAILALLALPLLITVREELMLYKLNKQNNDPSVIVSIVGEQKLPMVTVPQNTPPTSTLQEITEISPSCLENICNKPERGEDFTILQAIFSVDMALVYLATFTGCGSSLASIDNIGQIGESLHYPTQSIAIFVSWVSVFNFFGRVFSGFISETLMTKYKLPRPLMFAFSFLLTCIGQLFIAFPSPGSVYVASLIIGFGFGAQVPLLFAIISELFGLKRYSTLFNCGQLVVPFGSYILNVDIVGKLYDIEAIKEGSKKTGKGLTCTGAHCFGWSFTILASVTLFGALVALVLAYRTREFYKGDVYKKYREDMWIPQSEMEFYRLDNKKNIDD 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9581501 9583243 + MC03g0325 Mch3g0543 683446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0543 581 Pfam Nodulin-like 20 265 IPR010658 -
Mch3g0543 581 CDD MFS_Mch1p_like 19 535 - -
Mch3g0543 581 SUPERFAMILY MFS general substrate transporter 6 209 IPR036259 -
Mch3g0543 581 Gene3D MFS general substrate transporter like domains 321 550 IPR036259 -
Mch3g0543 581 Gene3D MFS general substrate transporter like domains 14 210 IPR036259 -
Mch3g0543 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 557 - GO:0016020(PANTHER)
Mch3g0543 581 SUPERFAMILY MFS general substrate transporter 250 549 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0543 Mch-Chr3:9581501 Mch3g0549 Mch-Chr3:9641114 2.45E-306 dispersed
Mch3g0542 Mch-Chr3:9570674 Mch3g0543 Mch-Chr3:9581501 8.79E-308 tandem
Mch3g0543 Mch-Chr3:9581501 Mch3g0544 Mch-Chr3:9605659 1.70E-278 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0543 - - - 0.0