Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0544 CAAGTTGCCGATGGGCGATGGTTTTCGGTGTTCGCTTCGTTCGTGATCATGATCGGCGCCGGCTCACCCTACCTATTCGGAACATACTCCAAAGTCATAAAGACCCAATTCGATTACAGCCAAACCCAAGTTAACACCTTGGGATTCTCCAAAGATCTCGGCTCCAACCTCGGAGTCTTCGCCGGACTTCTCGCCGAGGTGGCTCCGCCGTGGGTTCTGTTCGTCGTCGGCTCCTCCCTCAACTTCTTCAGCTTCATCATGATTTGGCTCTCCGTCACTCACCGGATCGCCAAGCCCGAGTTCTGGCAGATGTTCCTCTACGTCGGCTTGGCTGCCAACGCACAAAACTTCGCCAACACTGCGGTTATGGTCATCAGCGTTAAAAACTTCCCGGACCGACGAGGGATTATTATTGGCCTTCTCAAGGGCTTCGTCGGCCTCGGAGGGGCCGTCTTGACTCAGATCTATCTAGCCATTTATGGCCACGAAGATCCATCTGATGTGCTTCTTCTGCTCTCATGGTTTCCGTCCGTTATATCCATTGTTCTTTTGTTTTCAATTAGAACAATCAGAGCTCGCAAACATCCGGAGGAGCTTAAAGTGTTTTACCACCTGCTGTACGCATCCATAATTCTAGCCATCTCTATCCTTATTATTACCTTGACCCAAAAACACATTGTTTTCTCCCATGCTGCCTATTTGGGAAGCGTCGCCGTGGTTGTGGCCTTACTGTGTCTGCCCCTTCTGATTGCCATTAAAGAAGAATTCTTGCTTTTCAAGCTCAACAACCAAGCCGTGGATCCATCTGTCACCCTTTCCATTCCAGAGGAGAAGCAATCTCTACCGTACTCCAATATCTTACTATCCACAGTACTTGAAAAAGATTCCCCTTCTAAGCCAGAAAGAGGGGAAGATTTCACCATCTTGCAAGCTCTCCTCAGCAAAGACATGGCTCTTGTTTTCTTGGCAACTGTTTCTGCATGTGGGTCCTCCATTGTCGCCATCGACAATCTTGGACAAATCGCAGAATCACTTGCCTATCCTGCTCAATCCATAAGCGTCTTCGTTTCTTGGATTTCCATATTCAATTTCTTCGGTCGGGTCTTCTCTGGCTTCATCTCCGAAACGCTAATGACCAAATACAAATTACCTCGTCCTCTCATGTTCGCCCTTGCCCATCTCCTCACCTGCATTGGCATACTCTTCATCGCCTTTCCATATCATGGTTCGGTCTACGTGGCTTCATTGATCATTGGGTCTGGATTTGGAGCCCAAGTTCCTTTGTTATTCGCTATTATCTCTGATCTATTTGGCCTCAAGCACTACTCAACGCTGCTCAATTGTGGGCAACTGGCGGTGCCGCTTGGATCTTATATACTAAATGTACTTCTAGTAGGTAGGATGTATGATATGGAAGCCAATCGAGCTGGTAATACAAAGCACGGCAAGGGCCTAACTTGCAATGGACCTCATTGCTTTGGCGGCTCGTTCACAATTTTGGCAGCAATAACATTGTTTGGAGCAATGAGTTCACTTGCACTGGCTTGTAGGACTCGAAACTTTTACAAAGGCGACATATATAAGAGATATAGAGATGACATGTGGATTACCGAATCCGACATG 1623 47.5 QVADGRWFSVFASFVIMIGAGSPYLFGTYSKVIKTQFDYSQTQVNTLGFSKDLGSNLGVFAGLLAEVAPPWVLFVVGSSLNFFSFIMIWLSVTHRIAKPEFWQMFLYVGLAANAQNFANTAVMVISVKNFPDRRGIIIGLLKGFVGLGGAVLTQIYLAIYGHEDPSDVLLLLSWFPSVISIVLLFSIRTIRARKHPEELKVFYHLLYASIILAISILIITLTQKHIVFSHAAYLGSVAVVVALLCLPLLIAIKEEFLLFKLNNQAVDPSVTLSIPEEKQSLPYSNILLSTVLEKDSPSKPERGEDFTILQALLSKDMALVFLATVSACGSSIVAIDNLGQIAESLAYPAQSISVFVSWISIFNFFGRVFSGFISETLMTKYKLPRPLMFALAHLLTCIGILFIAFPYHGSVYVASLIIGSGFGAQVPLLFAIISDLFGLKHYSTLLNCGQLAVPLGSYILNVLLVGRMYDMEANRAGNTKHGKGLTCNGPHCFGGSFTILAAITLFGAMSSLALACRTRNFYKGDIYKRYRDDMWITESDM 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9605659 9607281 - MC03g0326 Mch3g0544 683447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0544 541 CDD MFS_Mch1p_like 5 508 - -
Mch3g0544 541 SUPERFAMILY MFS general substrate transporter 7 520 IPR036259 -
Mch3g0544 541 Gene3D MFS general substrate transporter like domains 5 202 IPR036259 -
Mch3g0544 541 Gene3D MFS general substrate transporter like domains 316 520 IPR036259 -
Mch3g0544 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 530 - GO:0016020(PANTHER)
Mch3g0544 541 Pfam Nodulin-like 6 252 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0539 Mch-Chr3:9535487 Mch3g0544 Mch-Chr3:9605659 0 dispersed
Mch3g0544 Mch-Chr3:9605659 Mch3g0549 Mch-Chr3:9641114 6.27E-287 dispersed
Mch3g0543 Mch-Chr3:9581501 Mch3g0544 Mch-Chr3:9605659 1.70E-278 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0544 - - - 0.0