Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0549 TTCGTGAAACAAGTTGCAGAAGGGCGATGGTTTTCAGTATTCGCATCGTTTCTGATCATGATCGGCGCCGGTTCAACTTACCTCTTCGGAACATACTCAAAACTCTTGAAGACCCAATTCGATTACGACCAAACCCAAGTTAACACCTTGGGATTTGCCAAAGATCTCGGCTCCAACTTCGGAGTTTTCGCCGGACTTCTCGCCGAGGTGGCTCCCTCGTGGGTCCTTTTCCTCGTCGGCTCATCCCTCAACTTCTTCAGCTACTTCATGATTTGGCTCTCCGTCACCCGCCGCATTGCCAACCCCCAATTCTGGCACATGTGCCTCTACATTTGCTTGGCTGCAAATTCCCAGAATTTCGCCAACACTGCAGTCCTCGTCACGAGCGTCAAAAACTTTCCGGAGCGACGGGGGATCATCCTGGGGCTCCTCAAGGGCTTCGTCGGGATCGGAGGCGCCATCTTGACGCAGATGTATTTAGCCATTTACGGCCACGAAAACCAGGCCAGTGTGATTCTCCTTCTAGCGTGGTTCCCCTCGGTCATATCCTTTGTGTTTGTGCTCTCCATTCGAACCATCAAAGTCCGGAAACACCCGGAGGAGCTCAAAGTGTTTTACCATTTGCTTTATGTCTCCATAATTCTGGCGCTCTATATCTTGTTCTTGACCTTAACCCAAAAGCAGGCTGTTTTCTCCCACGCTGGCTACGTGGGTGGCGCCTCCGTGATTGTGTGCTTGTTGTGTCTCCCCCTTTTGATTGCCATTAGAGAAGAATTCATGCTGTTCAATCTCAACAAACAAAACCAGGACGGACACGTCGCTGTTTTGATCCATGACCAAAAACCTCCGCCCAAAAGGGCATTGGAGGAGGACGCTATAGACAGTGTTTCAATCAAGCCGGAAAGAGGAGATGACTTCACCATCTTTCAAGCTCTCCTCAGTAAAGACATGGCTCTTCTTTTCATAGCTACACTTTCAGGATGTGGCTCGTCTATTGCCGCCATTGACAATATAGGCCAAATCGCGGAGTCGCTTCAATACCCGCCTCACTCCATAGCAATTTTCGTCTCCTGGGTCTCCATATTCAATTTCTTCGGCCGCGTCTTCTCCGGCTTCATCTCCGAAACCCTTATGGTCAAATACAAATTACCTCGCCCTCTCATGTTCGCCTCCTCCTTTCTCCTTACCTGCATTGGCCAGCTCTTAATCGCCTTCCCATATCGCGGCTCAGTCTACGCCGCTTCCTTGATCATTGGTTTCGGGTTTGGAGCCCAAGTTCCATTGCTATTCGCCATAATATCTGAGCTCTTCGGCCTCAAACACTACTCAACGCTCTTCAACTGCGGCCAACTCGCAGTCCCGTTCGGGTCTTATATACTAAATGTGGATGTAATAGGCAAGTTGTACGATATGGAAGCCATAAGACAAGGTGGAAAGAAGACTGGCAAGGGACTAACTTGCACTGGAGCTAATTGCTTTAGTAATTCCTTCACAATTTTGGCAGCAGTGACTTTTTTTGGAGCTCTCTCTTCGCTTGTGCTGGCTTATAGGACTCGAGACTTTTACAAAGGAGAAACGTATAAGAAATATAGAGAAGATATGTGGATTCCTAAAGCAGATATGGAATTCTATTGTTTGGATAACAGGAAA 1650 48.24 FVKQVAEGRWFSVFASFLIMIGAGSTYLFGTYSKLLKTQFDYDQTQVNTLGFAKDLGSNFGVFAGLLAEVAPSWVLFLVGSSLNFFSYFMIWLSVTRRIANPQFWHMCLYICLAANSQNFANTAVLVTSVKNFPERRGIILGLLKGFVGIGGAILTQMYLAIYGHENQASVILLLAWFPSVISFVFVLSIRTIKVRKHPEELKVFYHLLYVSIILALYILFLTLTQKQAVFSHAGYVGGASVIVCLLCLPLLIAIREEFMLFNLNKQNQDGHVAVLIHDQKPPPKRALEEDAIDSVSIKPERGDDFTIFQALLSKDMALLFIATLSGCGSSIAAIDNIGQIAESLQYPPHSIAIFVSWVSIFNFFGRVFSGFISETLMVKYKLPRPLMFASSFLLTCIGQLLIAFPYRGSVYAASLIIGFGFGAQVPLLFAIISELFGLKHYSTLFNCGQLAVPFGSYILNVDVIGKLYDMEAIRQGGKKTGKGLTCTGANCFSNSFTILAAVTFFGALSSLVLAYRTRDFYKGETYKKYREDMWIPKADMEFYCLDNRK 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9641114 9642763 - MC03g0327 Mch3g0549 683452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0549 550 CDD MFS_Mch1p_like 8 508 - -
Mch3g0549 550 Pfam Nodulin-like 9 255 IPR010658 -
Mch3g0549 550 SUPERFAMILY MFS general substrate transporter 10 520 IPR036259 -
Mch3g0549 550 Gene3D MFS general substrate transporter like domains 316 528 IPR036259 -
Mch3g0549 550 Gene3D MFS general substrate transporter like domains 3 204 IPR036259 -
Mch3g0549 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 528 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0542 Mch-Chr3:9570674 Mch3g0549 Mch-Chr3:9641114 2.51E-304 dispersed
Mch3g0543 Mch-Chr3:9581501 Mch3g0549 Mch-Chr3:9641114 2.45E-306 dispersed
Mch3g0544 Mch-Chr3:9605659 Mch3g0549 Mch-Chr3:9641114 6.27E-287 dispersed
Mch3g0549 Mch-Chr3:9641114 Mch5g1718 Mch-Chr5:17874044 2.09E-188 dispersed
Mch3g0547 Mch-Chr3:9622329 Mch3g0549 Mch-Chr3:9641114 5.23E-51 proximal
Mch3g0548 Mch-Chr3:9622824 Mch3g0549 Mch-Chr3:9641114 8.18E-125 tandem
Mch3g0549 Mch-Chr3:9641114 Mch3g0550 Mch-Chr3:9648891 3.28E-208 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0549 - - - 0.0