Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0550 GTCCGGTTCACGCTGCAGGTGCTTAAGGGGCGGTGGTTCACGGTGTTTGCGACGTTGCTGATCATGGCCGGCGCCGGCGCGACGTATCTGTTCGGGACGTACTCGAAACAGATCAAATCGACGCTGGGATACGATCAGACGACGCTGAATCTGATGGGGTTTTTCAAGGATTTCGGGGCGAACGTCGGCGTGCTCTCCGGCCTGGTGGCGGAGGTAACGCCGACGTGGTTCGTGCTCCTCCTCGGATCCGCCTTGAATTTCACCGGCTACTTCATGATCTGGCTCGCCGTCACCGGCCGAATCGCGAAGCCGGCGGTCTGGCAGATGTGTCTCTACATCTGCGTCGGAGCGAATTCGCAGAACTTCGCGAACACCGGCGCTCTGGTGACCTGCATCCAGAATTTCCCCGAGGGCCGCGGCGCTATGATGGGGCTTTTGAAGGGCCTCACCGGCCTCAGTGGCGCGATTCTCACGCAGATTTACCACGCCGCGTACGGCGATGACGCCACGTCGCTCATCCTCCTAATCGCGTGGCTCCCGGCCGCGCTCTCCGTCGTGTTCGTCTTCACGATTCGGAAGCTCAGTGACGATTACCAGAGACAGCCGAATGAGAGGAAAGTTTTTTACCATTTCCTCTTTGTCTCAATCGGGCTCGCAGTCTTCATCATGGCGATGAATCTCGCTCAGAAGGCAGTCGAATTCAATCGCGCAGCTTACGCCGGAAGCGCCACCGTCGCCTGCCTTTTCCTCTTCCTCCCTCTGCTTATCGTAATCAGAGAAGAGCTCAGGATCTGCAACACAAACAAAAACCAGCCAATCGAAAACCCAAAACCAATCGAACTCAAACCCAAAATCGCCGTCCAAGAATCAAAAGAAGAGAAGGAATACCCACCACCGGAATCGTGTTTCTCCAACATCTCCCACAAGCCGGAAAGAGGACAAGATTACACAATCCTACAAGCCCTCCTCAGCTGGGATATGTTGGTTCTGTTCATCGCGACATTCTGCGGATTGGGGACGAGCTTGACGTCGGTGGACAATTTGGGGCAAATCGGCGAATCCCTCGGCTACCCAACGAAAACTGTGAGCTCGTTCGTCTCGTTGGTCAGCATCTGGAATTACTTCGGCCGAATCTTTTCTGGGTTCGTCTCGGAGATTCTCCTGGAGAAATTCAAATTCCCTCGGCCATTAATGATGACTCTGGCCCTCCTCCTGTCCTGCGTCGGCCAGCTTCTGATCGCCTTCCCGGTGCCGGGCTCCGTCTACTTGGCGTCGATCATAATCGGGTTCACCTTCGGGGCTCAGCTTCCACTGCTGTTCGCCATAATTTCGGAGCTGTTTGGGCTCAAATATTTCTCGACTCTGTTCAACTTCGGGCAAATCGCGAGCCCGTTGGGGTCGTACATTCTGAACGTGCAGGTCACCGGAAAGCTGTACGATAAACAGGCGCTGAAGCAGCTGAGGGAAAAGGGGCTCGACAGGTCGGCCGTGAAGGAGCTGGTTTGTCTCGGGAAGCAGTGTTACAGGGAGTCGTTTTCGTTGACGGCCGGGGTTACGTTCGCCGGAGCTCTGATTTCGCTGATTTTGGTGGTGAGGACTCGCGAGTTTTACAGAGGGGACATTTACAAGAAGTTCAGAGACGATGAGAAGAACGAGGAG 1659 55.33 VRFTLQVLKGRWFTVFATLLIMAGAGATYLFGTYSKQIKSTLGYDQTTLNLMGFFKDFGANVGVLSGLVAEVTPTWFVLLLGSALNFTGYFMIWLAVTGRIAKPAVWQMCLYICVGANSQNFANTGALVTCIQNFPEGRGAMMGLLKGLTGLSGAILTQIYHAAYGDDATSLILLIAWLPAALSVVFVFTIRKLSDDYQRQPNERKVFYHFLFVSIGLAVFIMAMNLAQKAVEFNRAAYAGSATVACLFLFLPLLIVIREELRICNTNKNQPIENPKPIELKPKIAVQESKEEKEYPPPESCFSNISHKPERGQDYTILQALLSWDMLVLFIATFCGLGTSLTSVDNLGQIGESLGYPTKTVSSFVSLVSIWNYFGRIFSGFVSEILLEKFKFPRPLMMTLALLLSCVGQLLIAFPVPGSVYLASIIIGFTFGAQLPLLFAIISELFGLKYFSTLFNFGQIASPLGSYILNVQVTGKLYDKQALKQLREKGLDRSAVKELVCLGKQCYRESFSLTAGVTFAGALISLILVVRTREFYRGDIYKKFRDDEKNEE 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9648891 9650549 - MC03g0328 Mch3g0550 683453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0550 553 CDD MFS_Mch1p_like 10 523 - -
Mch3g0550 553 SUPERFAMILY MFS general substrate transporter 12 538 IPR036259 -
Mch3g0550 553 Gene3D MFS general substrate transporter like domains 320 537 IPR036259 -
Mch3g0550 553 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 546 - GO:0016020(PANTHER)
Mch3g0550 553 FunFam Nodulin family protein 318 539 - -
Mch3g0550 553 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0852 Mch-Chr1:11935173 Mch3g0550 Mch-Chr3:9648891 4.31E-217 dispersed
Mch3g0535 Mch-Chr3:9481843 Mch3g0550 Mch-Chr3:9648891 1.86E-213 dispersed
Mch3g0547 Mch-Chr3:9622329 Mch3g0550 Mch-Chr3:9648891 8.64E-38 dispersed
Mch3g0548 Mch-Chr3:9622824 Mch3g0550 Mch-Chr3:9648891 7.36E-79 dispersed
Mch3g0550 Mch-Chr3:9648891 Mch9g1814 Mch-Chr9:19936996 3.36E-235 dispersed
Mch3g0549 Mch-Chr3:9641114 Mch3g0550 Mch-Chr3:9648891 3.28E-208 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0550 - - - 0.0