Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g0556 | GGGAATGTTGAGGGATCCCCAGGGAGCTCGATGCATGGAGTGACCGGGAGAGAGCAGACATTCGCGTTCTCGGTGGCGTCCCCAATAGTCCCAACAGACACGAGCGCCAAATTCGCACTCCCGGTGGACTCGGAGCACAAGGCGAAGGTGTTCAAGATCTTCTCCTTAGCCAACCCCCACATGAGAACCTTCCACCTCTCATGGATCTCCTTCTTCACCTGCTTCGTCTCCACCTTCGCCGCCGCCCCTCTCGTCCCCATCATCCGCGACAACCTCAACCTCACCAAGTCCGACATCGGCAACGCCGGCGTCACCTCCGTCTCCGGCAGCATCTTCTCCCGTCTCGTCATGGGCGCCGTCTGCGACCTCCTCGGCCCCCGCTACGGCTGCGCCTTCCTCATCATGCTCTCCGCCCCCACCGTCTTCTGCATGTCCTTCGTCTCCTCCCCCGCCGGCTACATCGCCGTCCGCTTCATGATCGGCTTCTCCCTCGCCACCTTCGTCTCCTGCCAGTACTGGATGAGCACCATGTTCAACAGCCAGATCATCGGCCTCGTCAACGGCACCGCCGCCGGCTGGGGCAACATGGGCGGAGGCGCCACCCAGCTCCTCATGCCTCTCCTCTACGAGATCATCAAGAAGGTCGGGGCCACCCCCTTCACCGCCTGGAGGATCGCCTTCTTCATCCCCGGCTCCCTCCACGTCCTCATGGGCATTTTGGTCATGACTCTCGGCCAGGACTTGCCCGACGGAAATCTCAGCAGTCTCCAAAAGAAGGGCACCGTGGCCAAGGATAAATTTTCCAACGTGCTGTGGTACGCGGTCACCAACTACAGAACTTGGATCTTCGTTCTCCTGTATGGCTACTCAATGGGCGTCGAGCTCTCCACCGACAACGTCGTCGCCGAGTACTTCTACGACAGGTTCGACCTGAAGCTGCACACGGCGGGAATCATCGCAGCCACCTTCGGGATGGCGAATCTAGTGGCTCGCCCCTTCGGAGGGTACGCTTCCGACTTCGCAGCTCGATATTTCGGGATGAGGGGAAGGCTGTGGACCCTGTGGATCCTCCAAACGTGCGGTGGAGTGTTCTGCATGTGGCTTGGGAAGGCAACCCAGCTTCCAGTGGCCATAGTGGCCATGATCCTGTTCTCAATAGGAGCCCAGGCTGCGTGCGGAGCCACGTTTGGGATCATTCCCTTCATTTCCCGGCGCTCGTTGGGCATTATATCGGGCCTCACAGGCGCAGGAGGCAACTTCGGGTCTGGGTTGACTCAATTGGTGTTCTTCTCGACAACGAAATACTCCACAGACAAAGGGTTGTTCTTGATGGGCATTATGATCGTGTGCTGCACTCTTCCGGTCACATTGGTTCACTTCCCGCAGTGGGGGAGCATGTTCTTGCCGCCCACCAAACACGTGGAGAAATCCACAGAAGAATTCTATTATGGGTCTGAATGGACTGAGGACGAGAAGAAGAAGGGTCTGCACCAGCAGAGCATCAAGTTCGCTGAGAATAGCAGGTCCGAACGTGGCAGGAAAATTGCGTCAGCTCCAACCCCACCCAACGCCACTCCTTCCCATGTT | 1587 | 58.48 | GNVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTSAKFALPVDSEHKAKVFKIFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSSPAGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLLMPLLYEIIKKVGATPFTAWRIAFFIPGSLHVLMGILVMTLGQDLPDGNLSSLQKKGTVAKDKFSNVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVVAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDFAARYFGMRGRLWTLWILQTCGGVFCMWLGKATQLPVAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTTKYSTDKGLFLMGIMIVCCTLPVTLVHFPQWGSMFLPPTKHVEKSTEEFYYGSEWTEDEKKKGLHQQSIKFAENSRSERGRKIASAPTPPNATPSHV | 529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9732734 | 9734401 | + | MC03g0332 | Mch3g0556 | 683459 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g0556 | 529 | MobiDBLite | consensus disorder prediction | 491 | 529 | - | - | |
Mch3g0556 | 529 | FunFam | High affinity nitrate transporter | 56 | 253 | - | - | |
Mch3g0556 | 529 | SUPERFAMILY | MFS general substrate transporter | 58 | 459 | IPR036259 | - | |
Mch3g0556 | 529 | Gene3D | MFS general substrate transporter like domains | 57 | 252 | IPR036259 | - | |
Mch3g0556 | 529 | CDD | MFS_NRT2_like | 64 | 457 | IPR044772 | GO:0015112(InterPro) | |
Mch3g0556 | 529 | Gene3D | MFS general substrate transporter like domains | 263 | 465 | IPR036259 | - | |
Mch3g0556 | 529 | Pfam | Major Facilitator Superfamily | 68 | 424 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Mch3g0556 | 529 | FunFam | Nitrate transporter 2.1 | 264 | 465 | - | - | |
Mch3g0556 | 529 | PANTHER | HIGH-AFFINITY NITRATE TRANSPORTER 2.3 | 7 | 513 | IPR044772 | GO:0005886(PANTHER)|GO:0015112(InterPro)|GO:0015112(PANTHER)|GO:0015706(PANTHER)|GO:0071249(PANTHER) | |
Mch3g0556 | 529 | MobiDBLite | consensus disorder prediction | 491 | 512 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g0556 | Mch-Chr3:9732734 | Mch9g2263 | Mch-Chr9:22953763 | 2.04E-212 | dispersed | |
Mch3g0556 | Mch-Chr3:9732734 | Mch3g0557 | Mch-Chr3:9741393 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch3g0556 | K02575 | - | csv:101218244 | 1023.85 |