Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0567 ATGGAGAAATCTGGGTACGGTCGCGATGGAATTTTCCGGTCCTTACGACCTCCGCTCGTCTTTCCCAAAGACCACAATCTCTCGATGATCTCCTTCCTCTTCCGAAATTCATCGTCTTATCCGAACAGACTCGCCATTGTCGACGCGGAATCCTCGGAAACTGTGTCGTATTCTCAGCTTAAAGCTTCCGCAATCAGGGTCTCCAATGGCTTGCTCCAATTGGGCATCAAGAAGAACGACGTGGTACTGATTTTTGCCCCTAATTCAATTCAATTCTCTATTTGTTTCATTGGAATTATTGCCATTGGGGCTATTGCAACCACATGCAATCCCGTATTCACGGTCTCTGAGTTAACCAAGCAAGTTAACGACGCTAAACCCAAACTCGTGATTACCGTTGCTGAGTTATGGGACAAAGCCAAGAATCTAAACCTCCCAGCAATGTTACTAGAACAGAAAATTCCTCCAGAAATCTCCTCTCGTTCGAAAATCTATTGTTTCGATGATTTGATAAACATGGCGGGTAATGAATCTGGCCCGGAATTCCCAATTGTGGGGGTGAACCAGAATGATACAGCTACGCTTCTGTATTCATCAGGAACAACAGGAGCGAGTAAGGGTGTGATTCTGACTCACAGAAACTTCATAGCATCTTCACTGATGATAACAATGGACCAGACGATGAGGGGAGAGACAAATTGTGTATTTCTGAACTTTTTGCCGATGTTTCATGTGTTTGGATTGGCTTGCATAACATATGCGCAGCTGCAGAAGGGGAACACCATTGTCTCAATGCCAAGGTTTAATTTGGAGAAGGCTTTGTGGGCAGTGGAGAAGTACAAGGTGACAGATCTGTGGGTTGTGCCGCCTGTTGTGCTTGCTTTGGCTAAGCAGAGTGTGGTGAAGAAGTACGACCTTTCGTCCGTGAAGCATGTCGGTTCGGGCGCTGCACCTCTCGGGAGGGAACTAATGGAGGAGTGTGCTAAGAACATTCCCAGTGCTGTGGTTCTCCAGGGTTATGGTATGACTGAGACTTGCGGAGTTGTTGCTTTGGAGAATCCAGCAGTTGGCGAACGAAATTCCGGTTCAGCTGGAACACTTGCTCCCGGTGTTGAGGCTCAAATAGTCAGTGTAGATACTTTGAAGCCTCTTCCTCCTAATCAATATGGAGAGATATGGGTTCGGGGACCGAATATGATGCTCGGTTATTTCAACAATCCACAGGCCACCAAGCAAACTATTGATAAATACGGCTGGGTGCATACTGGAGACCTTGGATACTTCGATGAAAACGGACAGCTTTATGTTGTCGACCGAATCAAGGAACTCATCAAGTACAAAGGTTTCCAGGTTGCACCAGCTGAGCTTGAAGCACTGTTGGTTTCTCACCCTCAGATACTAGATGCTGTTGTCATCCCCTACCCTGATGCCGAAGCTGGAGAAGTTCCAATCGCTTACGTTGTTCGATCTACCAATAGTTCTTTGACAGAAGAAGACATCCTCAAATTCGTTGCCAATCAGGTTTCTCCTTACAAAAGGTTAAGGAGAGTGACATTCATCAGCAGTGTCCCCAAGTCTGTTTCCGGGAAAATCCTCAGGAGAGAACTCATCGAGAAAGTAAGAGCTAAAATCTGA 1635 46.18 MEKSGYGRDGIFRSLRPPLVFPKDHNLSMISFLFRNSSSYPNRLAIVDAESSETVSYSQLKASAIRVSNGLLQLGIKKNDVVLIFAPNSIQFSICFIGIIAIGAIATTCNPVFTVSELTKQVNDAKPKLVITVAELWDKAKNLNLPAMLLEQKIPPEISSRSKIYCFDDLINMAGNESGPEFPIVGVNQNDTATLLYSSGTTGASKGVILTHRNFIASSLMITMDQTMRGETNCVFLNFLPMFHVFGLACITYAQLQKGNTIVSMPRFNLEKALWAVEKYKVTDLWVVPPVVLALAKQSVVKKYDLSSVKHVGSGAAPLGRELMEECAKNIPSAVVLQGYGMTETCGVVALENPAVGERNSGSAGTLAPGVEAQIVSVDTLKPLPPNQYGEIWVRGPNMMLGYFNNPQATKQTIDKYGWVHTGDLGYFDENGQLYVVDRIKELIKYKGFQVAPAELEALLVSHPQILDAVVIPYPDAEAGEVPIAYVVRSTNSSLTEEDILKFVANQVSPYKRLRRVTFISSVPKSVSGKILRRELIEKVRAKI 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9912064 9915941 - MC03g0341 Mch3g0567 683470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0567 544 Gene3D - 442 543 IPR045851 -
Mch3g0567 544 SUPERFAMILY Acetyl-CoA synthetase-like 17 542 - -
Mch3g0567 544 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Mch3g0567 544 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Mch3g0567 544 Gene3D - 10 441 IPR042099 -
Mch3g0567 544 CDD 4CL 21 536 - -
Mch3g0567 544 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Mch3g0567 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 536 - GO:0016405(PANTHER)
Mch3g0567 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 441 - -
Mch3g0567 544 Pfam AMP-binding enzyme 35 404 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0118 Mch-Chr1:2997469 Mch3g0567 Mch-Chr3:9912064 2.26E-46 dispersed
Mch3g0567 Mch-Chr3:9912064 Mch9g1823 Mch-Chr9:20021828 5.27E-139 dispersed
Mch3g0567 Mch-Chr3:9912064 Mch8g1049 Mch-Chr8:7367318 8.80E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0567 K01904 - csv:101220141 920.998