Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0620 ATGGCGCTCTCTCCGTCCCTAGAATTCATCCGATTTCCTCCACAGTCATTATCCTCATCTTCTCATCATCTTTTCATCTCCGGCCTCGGCTCTGTATCGCGCTTCTTCCGATCTCCATGGCTTTCCTCTCTCGTTCCGTCGCGGACGTGCAGGATCCCGCTGGTTCCGGTTGTGGTGAACCTCAATTTGCCTTCGAGAACGAAATGTTTCTCGATGTCCACCGAGGAGGAGCGATGGAGCGATTCGGAAGCGTTGGCGTCCGATGTTGAGGAAGGAGGAGATCGCGACGATGATATTCGTGTTCAGCATCAGAGCTCTGTGGCCGCTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCAAGTGATTATCTGTCACTGGCCATTCGAGAGCCGGTATACGAGGTATTAGAGGTTAAGGCCGATGGAACCGTATCCACTAGGAAGATTAACAGACGCCAGCTATTGAAGTCAAGTGGGCTCCGTCCACGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCGTCATTAGTGGTTCGTGAACATGCTCTTTTGCTTAATCTGGGTTCACTGCGAGCAATAGCTATGCCGGATTGCGTCCTCATATTTGATTACAACCGTCAAGGAGGACAAGCTTTCATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTAGAGGTCGTTGAAGCTGCATTGCTTTCACGAACACAGCGTTTGGAGCAGCGATTAATGAAAGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTGCTGCCCAACAAATTAACTGGTGATATGTTGGAACAACTTCGTATTAGCAAGCAGACTTTGGTTGAATTGGGTTCCAGGGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGTATCTGTATTATGGGAAGAAACTGCACGCTTAATAAAAGAAACGATAATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGACTGCTGATGAAGAGGAGGAAGAAATAGAAATGCTGTTGGAAAATTATCTTCAGAGATGCGAATCTTGTCATGGCCAGGCTGAAAGACTTCTGGATTCTGCAAAAGAAATGGAAGATTCTATTGCTGTTAATTTGAGCTCTCGGAGACTAGAGGTTAGCAGAGTGGAACTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTGGGTGCTTTAATTGCAGGAATATTTGGCATGAACTTACGATCATACCTTGAAGAACATGTGTTTGCCTTCTGGTTAACAACAGCCGGGATAATTGCTGGCGCTGTAGTGGCATTCTTTCTCATGTATTCGTATCTCAGAGATCGGAGAATCCTATAA 1392 46.55 MALSPSLEFIRFPPQSLSSSSHHLFISGLGSVSRFFRSPWLSSLVPSRTCRIPLVPVVVNLNLPSRTKCFSMSTEEERWSDSEALASDVEEGGDRDDDIRVQHQSSVAAAASAQRISSSSPSDYLSLAIREPVYEVLEVKADGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLVVREHALLLNLGSLRAIAMPDCVLIFDYNRQGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTGDMLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDNVECSLPLDKQTADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALIAGIFGMNLRSYLEEHVFAFWLTTAGIIAGAVVAFFLMYSYLRDRRIL 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10588767 10598977 - MC03g0386 Mch3g0620 683523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0620 463 CDD Mrs2_Mfm1p-like 136 462 IPR039204 -
Mch3g0620 463 Gene3D - 127 210 - -
Mch3g0620 463 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 107 462 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Mch3g0620 463 FunFam Magnesium transporter MRS2-11, chloroplastic 212 394 - -
Mch3g0620 463 FunFam Magnesium transporter MRS2-11, chloroplastic 129 210 - -
Mch3g0620 463 Coils Coil 343 363 - -
Mch3g0620 463 Gene3D Magnesium transport protein CorA, transmembrane region 211 394 - -
Mch3g0620 463 Pfam Magnesium transporter MRS2-like 139 393 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0620 Mch-Chr3:10588767 Mch8g1060 Mch-Chr8:7453566 1.18E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0620 K16075 - csv:101219314 709.523