Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0655 TCAAATGATATAAAATCCAACTCTCCTTCCTCCCTCCTTCCCTCACAATTTCCTCTCACTCTCTCTCTCTCTCTAATTTATCAATCTATTATTACATTGAAAATGGATTTTCATTTTGATCTAAACTTTACAGAAGAATCCTCTTCTTTGCCATCCACAATCTCCCTCTTGTTCTTCTCCTTTACCTTCATCTTCTCCATCTTTTCTCTCTCTCTCTATATCTTGCGGCTGAGGCCGTGGTGCAACTGCGACCTCTGCCGCTCCTATCTCTCCTCAGCCTGGTCGGAGTCGTTCCCAAACCTCTCCGACTGGTACGCAGACCTCCTACGTCGCTCACCTTCTGCTACGATCCACCTCCACGTCCTCTCGAACCTCGTCACCGCGAATCCGGACAACGTGGAGCACATCCTCAGCTCCAACTTCCAAAACTACCCAAAGGGGCAGCCATTCTCCTCACTCCTAGGCGACCTCCTCGGCCACGGCATCTTCAACGTGGATGGCGACACGTGGCGCTTCCAGCGTAAGATGGCCAGCCTGGAGCTGGGCAGCGTGGCAGTCCGGTCCCACGCTTTCGAGATCGTGTGGGCCCAGATTCGAACAAGGCTGATCCCGGTGATGTCTGCAGCGGCGATGGCGACGGCGGTGGACTTGCAGGACGTGTTCCGTCGGTTCTCGTTCGACGTGATCTGTAGATTCTCGTTCGGGGTGGACCCAGGATGTCTGCGGCTGTCGATGCCGGTGTCGGAGTTTGCGGTGGCGTTCGACGTGGCGTCGAGGGTGTCGGCGGAGAGGGCGATGGGGACGTGGCCGGTGATGTGGAGGATTAAGAGGGCGCTTAATTTGGGGTCGGAGAGGAGGCTGAAGGAAGCTATTAAGATTGTTAATGGGCTAGCTGAAGAGGTCATTCGCCACCGCCGCCAAATTGGCTTCTCCGGTCGGAATGATCTTCTTTCAAGATTCATGGCTTCCACTCATGATGATCGATATCTCCGGGATATAGTGGTGAGCTTCCTCCTGGCTGGACGGGACACGGTGGCGTCGGCGTTGACCAGCTTCTTCTGGCTCCTGGCCCAGCACCCGGAAGTAGAGGCTAAAATTCTGTCCGAGTCGGACCGGGTCATGGGTCCGGACCGGGACGCGGCGGCGAGTTTCGAGAATCTCCGAGACATGCACTACCTCCACGCGGCGGTCTACGAGAACATGCGCCTCTTCCCCCCGGTCCAGTTCGACTCCAAGTTTGCCGTCGATGATGACGTCCTCCCGGACGGCACCTTCGTCCACAAGGGCACAAGGGTAACTTACCACCCCTACGCCATGGGTCGGATGGACCGGATCTGGGGACCCGATTGCCTCCGCTTCAACCCGGACCGTTGGTTGAACAATGGTTGCTTCTCTCCCGAAAACCCATTTAAGTTCCCGGTTTTCCAGGCCGGTCTAAGGGTCTGTTTGGGCAAGGAACTGGCGGTGATGGATATTAAGAGCGTCGCGGTGGCTCTGGTTCGAAAGTTTCAAATCCGGTTGGACAAACCCGACCGAGTTGCCCGATTTGCTCCCGGTCTAACGGCTAGTTGGAGGGGTGGGTTGCCCGTTCGAATTCAAGAAAGAACACCAAATTAA 1617 55.66 SNDIKSNSPSSLLPSQFPLTLSLSLIYQSIITLKMDFHFDLNFTEESSSLPSTISLLFFSFTFIFSIFSLSLYILRLRPWCNCDLCRSYLSSAWSESFPNLSDWYADLLRRSPSATIHLHVLSNLVTANPDNVEHILSSNFQNYPKGQPFSSLLGDLLGHGIFNVDGDTWRFQRKMASLELGSVAVRSHAFEIVWAQIRTRLIPVMSAAAMATAVDLQDVFRRFSFDVICRFSFGVDPGCLRLSMPVSEFAVAFDVASRVSAERAMGTWPVMWRIKRALNLGSERRLKEAIKIVNGLAEEVIRHRRQIGFSGRNDLLSRFMASTHDDRYLRDIVVSFLLAGRDTVASALTSFFWLLAQHPEVEAKILSESDRVMGPDRDAAASFENLRDMHYLHAAVYENMRLFPPVQFDSKFAVDDDVLPDGTFVHKGTRVTYHPYAMGRMDRIWGPDCLRFNPDRWLNNGCFSPENPFKFPVFQAGLRVCLGKELAVMDIKSVAVALVRKFQIRLDKPDRVARFAPGLTASWRGGLPVRIQERTPN 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10976120 10978776 - MC03g0413 Mch3g0655 683558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0655 538 PANTHER CYTOCHROME P450 81 527 - -
Mch3g0655 538 SUPERFAMILY Cytochrome P450 99 535 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 Gene3D Cytochrome P450 91 538 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch3g0655 538 CDD CYP86A 125 528 - -
Mch3g0655 538 Pfam Cytochrome P450 118 511 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0655 Mch-Chr3:10976120 Mch6g0068 Mch-Chr6:397319 7.04E-129 dispersed
Mch3g0655 Mch-Chr3:10976120 Mch5g1628 Mch-Chr5:17132359 4.51E-224 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0655 K20624 - csv:101207724 760.37