Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0674 AAAATTCCTTGTTCTTTGGCGCTCGCCTTAGGTCTCATGATGCTCTTGAGCTTCGTAGTTTCGAGCTCTGGAAACCTTCAGGTGGGATTCTATAAGGGAAAATGTGGCTTCAGAGATGTTGAATCCATCGTTAGAAATGTCGTTACTGCTGCACTTGCGGGGGATCGAACTCTCACTGCCGCTCTCCTTCGTTTACAGTTCCATGACTGCTTTGTTTCTGGATGTGACGCTTCCCTCCTACTGGATGGAAGCAATAGCGAGAAGAGAGCTCCTCCGAACCTGAGCGTAAGAGGTTACGAACTTATTGATGCAGTGAAGAATGCTGTGGAGAGGGCATGCCCTGGAGTTGTTTCTTGTGCTGATATTATCGCCATGGCTACAAGAGATGCTGTTTCTTGGGCTGGAGGAGGACGGTACGGCGTGGAGACCGGACGGCGAGACGGGTTGAAACCCGCCTTTAACATAGATCTTCCGGGGCCTTCGATATCAGTCTCGGACTCCATTGCAGCCTTTTCTAAGAGGAACCTAAGTGTTACAGATATGGTTTATCTTCTTGGTGGCCACACTGTTGGGGTAGCACATTGCATTTTCTTCAAGGATCGCCTCTATAATTACAAGAACACAGGGAGACCCGACCCGACCATCGATCCATGGTTGCTCAACAACCTGCGAAACCAATGTCCTCGAAATTCAGACAACGACAATGCTGTATTTCTTGACCAGAACTTTCTAAGTTCTTTCGTCGTCGACAAGTCATTTCATAAACAGATATTGCAACGAAGAGGGATACTGGAAATCGATCAACAACTTGCTTTAAATCCATTAACGAAAGATCTAGTGTCGAATGTAGCATTTGGATTCGACTTCTCGTATAAGTTTGGACAAGCCATGATCAATATGGGAAGAATTCAAGTTCTCACTGGTTCTCAGGGGGAGATTAGA 942 46.39 KIPCSLALALGLMMLLSFVVSSSGNLQVGFYKGKCGFRDVESIVRNVVTAALAGDRTLTAALLRLQFHDCFVSGCDASLLLDGSNSEKRAPPNLSVRGYELIDAVKNAVERACPGVVSCADIIAMATRDAVSWAGGGRYGVETGRRDGLKPAFNIDLPGPSISVSDSIAAFSKRNLSVTDMVYLLGGHTVGVAHCIFFKDRLYNYKNTGRPDPTIDPWLLNNLRNQCPRNSDNDNAVFLDQNFLSSFVVDKSFHKQILQRRGILEIDQQLALNPLTKDLVSNVAFGFDFSYKFGQAMINMGRIQVLTGSQGEIR 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11204637 11206138 + MC03g0431 Mch3g0674 683577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0674 314 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 Gene3D - 29 314 - -
Mch3g0674 314 FunFam Peroxidase 29 158 - -
Mch3g0674 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Mch3g0674 314 ProSiteProfiles Plant heme peroxidase family profile. 25 314 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PANTHER PEROXIDASE 25-RELATED 17 314 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Mch3g0674 314 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Mch3g0674 314 Gene3D Peroxidase, domain 2 158 300 - -
Mch3g0674 314 CDD secretory_peroxidase 25 314 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch3g0674 314 SUPERFAMILY Heme-dependent peroxidases 26 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0674 314 FunFam Peroxidase 158 300 - -
Mch3g0674 314 Pfam Peroxidase 44 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0674 Mch-Chr3:11204637 Mch6g0723 Mch-Chr6:4975018 5.83E-81 dispersed
Mch3g0674 Mch-Chr3:11204637 Mch10g0764 Mch-Chr10:5342204 1.60E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0674 K00430 - csv:101210173 469.544