Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0704 ATGGCTGTTCTCTTTTCCTTTTTCGTGTTTTCTCTTCTCCTAACCCCTTCCTTTGCTGCTAAAAAGCCATATGTGGTGTTATTGGGATCCCATTCACATGGCTTGGAAATTTCAGAGGTGGATCTTCAAAGGGTGGCTAATTCCCATTACAGATTGCTTGGATCCTTATTGGGAAGTACTAAAAAGGCAAAGGATGCCATATTTTACTCCTACAAGAAGCATATAAACGGCTTCGCAGCAGTCCTGGAAGAGGAAGATGCAGCTGCACTTGCAAAGCACCCAGAAGTTGCAGTAGTTTTAGCAGATGAAATGATGAAATTACACACAACTCATTCATGGGGCTTCATGCATTTGGAGAGAAAAAATAGTTCAATTCCCTCTTCTGCATGGGGAAAAGCCAGATTTGGAGAAGACACCATTATTGCCAATCTCGACTCTGGAGTGTGGCCTGAATCAATGAGCTTCAGAGACAGTGGCATTAGAAAACCTATCCCTTCCAGATGGAAAGGATCCTGCGAGCAGGGATTCCCCTGCAACAGAAAATTAATTGGAGCAAAATTCTACAACGAGGGTTACATGGCATACATGCGGAATATGAACCCAAATTTTAACGTGTCCACCGTGGCCAACTCCGCCCGGGATGACGCCGGCCACGGCAGCCACACGCTCTCCACGGCCGGCGGCAACTTCGTGGCGGCCAAGAACGTGTTTGGGTCATCCGGGTTCGGGATGGCAAAAGGCGGGTCGCCCAAGGCCCGATTGGCCGCGTACAAGGTTTGCTGGGGTTCCAATGTCGGCTGCCCCGGCGCCGACATTCTGCAGGGTTTGGACGACGCCATCCACGACGGTGTCGACGTCGTTTCTTACTCAATTGGCGGCGTTAATGTGCCTTACTACCAAGATTTCTTCGCCATCGCCTCCTTTCAAGCCGTTAAGAACGGTATCTCCGTCGTCTGCTCCGCCGGGAACGCCGGCCCCGGCCCCGGAACCGCCGTCAACCTCGCCCCTTGGTTGTTCACTGTCGGTGCCAGCACTTTGGACCGCCGGATTGTGGCTGCTGTTCAGCTTAATAATGGCCAACGTTTTCAGGGTTCGAGCCTTTCGAAGGGTTTGCCGGAAGAGAAATATTATCCATTGATAAGCGGAGGTCAAGCGGCGGCCGGCGGAGCATACATCAACGACGCCATGCTGTGCAAGGCCGGAGCTTTGGATCCGGCGAAGGTGAAGGGGAAGATATTGGCATGCATGCGTGGAGAAACAGCGAGAATCGATAAGGGAACTGAAGCCGCCAAGGCCGGCGCCGTCGGGATGATCCTCTGCAACGACCAGCGCGACGGTGAAGGGACCTACTCCGACATGCACGTGCTTCCGGCTACCCACATTGGCTATCAAGCTAGTCTCGCCGTCTTTGACTACCTCGATAACACTCAAAATCCAATGGCATATCTTGTACCACCATCTGAGAAGTTCGACTTGAAGCCTGCTCCAACCATGGCTGACTTCTCGTCCCGAGGACCCAATGTAATTACGCCAGAGATTATCAAGCCTGATATCACTGCTCCTGGAGTTAACATTATAGCAGCTTATACTCAATCACATGGCCCCTCCGAAGATCCCTCCGACGGCCGCAGGGTTCCTTACATGACCATGTCCGGAACATCCATGTCTTGTCCACACATCTCCGGCGTCGTTGGCCTTCTCAAAACTCTCCACCCCGATTGGAGTCCCGCTGCGATTAAATCTGCGATCATGACCACTGCGAGAGTAAGAGACAACACAATGAGCCCGATGATTGACGGTGGCTCGCCACGTGGCGACCCTGCGACGCCGTTCTCCTACGGCTCGGGCCACGTCCAACCGGTCGCCGCCATGGATCCCGGGTTGGTCTACGACCTAACCACCGAGGATTACTTGAACTTCCTCTGTGCCCTAGGGTACGACTGGAGCATGATCAGAGCCTTCTCCGACGACACCCCCTACGACTGCCCGCCTTCCGCCAGTCTTCTCGACTTCAACTACCCGTCCATCGGAGTTCAAAATCTTAACGGACAAGTAACGGTCACCAGAAAACTGAAGAACGTCGGATCTCCGGGAGTCTACAGGGCGAGCGTCCGCCGGCCGGAAGGAGTCGCCGTTACGGTAGAGCCGAGGGTGTTGAGGTTCGAGAATGTCGGGGAGGAGAAGAGCTTCAGTGTTACGCTCGCCGGAAAGTTGCCGCAAAACGCCGTCGTCGACGGGACTCTGATTTGGTCCGACGGCAAGCACTTCGTCAGAAGCCCTATTGTGGTTTCGTCTGGCTCATTTATTTAG 2310 53.55 MAVLFSFFVFSLLLTPSFAAKKPYVVLLGSHSHGLEISEVDLQRVANSHYRLLGSLLGSTKKAKDAIFYSYKKHINGFAAVLEEEDAAALAKHPEVAVVLADEMMKLHTTHSWGFMHLERKNSSIPSSAWGKARFGEDTIIANLDSGVWPESMSFRDSGIRKPIPSRWKGSCEQGFPCNRKLIGAKFYNEGYMAYMRNMNPNFNVSTVANSARDDAGHGSHTLSTAGGNFVAAKNVFGSSGFGMAKGGSPKARLAAYKVCWGSNVGCPGADILQGLDDAIHDGVDVVSYSIGGVNVPYYQDFFAIASFQAVKNGISVVCSAGNAGPGPGTAVNLAPWLFTVGASTLDRRIVAAVQLNNGQRFQGSSLSKGLPEEKYYPLISGGQAAAGGAYINDAMLCKAGALDPAKVKGKILACMRGETARIDKGTEAAKAGAVGMILCNDQRDGEGTYSDMHVLPATHIGYQASLAVFDYLDNTQNPMAYLVPPSEKFDLKPAPTMADFSSRGPNVITPEIIKPDITAPGVNIIAAYTQSHGPSEDPSDGRRVPYMTMSGTSMSCPHISGVVGLLKTLHPDWSPAAIKSAIMTTARVRDNTMSPMIDGGSPRGDPATPFSYGSGHVQPVAAMDPGLVYDLTTEDYLNFLCALGYDWSMIRAFSDDTPYDCPPSASLLDFNYPSIGVQNLNGQVTVTRKLKNVGSPGVYRASVRRPEGVAVTVEPRVLRFENVGEEKSFSVTLAGKLPQNAVVDGTLIWSDGKHFVRSPIVVSSGSFI 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11413344 11416645 - MC03g_new0248 Mch3g0704 683607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0704 769 CDD PA_subtilisin_like 354 483 - -
Mch3g0704 769 SUPERFAMILY Subtilisin-like 107 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch3g0704 769 Pfam Fibronectin type-III domain 670 763 IPR041469 -
Mch3g0704 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Mch3g0704 769 ProSiteProfiles Serine proteases, subtilase domain profile. 112 624 - -
Mch3g0704 769 FunFam Subtilisin-like protease SBT5.3 13 108 - -
Mch3g0704 769 FunFam Subtilisin-like protease SBT1.5 641 766 - -
Mch3g0704 769 SUPERFAMILY PA domain 403 458 IPR046450 -
Mch3g0704 769 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Mch3g0704 769 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Mch3g0704 769 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Mch3g0704 769 Gene3D Peptidase S8/S53 domain 138 637 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch3g0704 769 Pfam Peptidase inhibitor I9 24 108 IPR010259 -
Mch3g0704 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 108 IPR037045 -
Mch3g0704 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 762 IPR045051 -
Mch3g0704 769 Pfam Subtilase family 136 616 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch3g0704 769 Pfam PA domain 397 466 IPR003137 -
Mch3g0704 769 FunFam subtilisin-like protease SBT1.5 347 490 - -
Mch3g0704 769 Gene3D - 347 490 - -
Mch3g0704 769 FunFam Subtilisin-like protease SBT1.5 138 361 - -
Mch3g0704 769 Gene3D - 641 766 - -
Mch3g0704 769 CDD Peptidases_S8_3 106 587 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0704 Mch-Chr3:11413344 Mch4g0363 Mch-Chr4:2285821 2.74E-273 dispersed
Mch3g0704 Mch-Chr3:11413344 Mch1g1263 Mch-Chr1:14859196 1.13E-182 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0704 - - - 0.0