Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch3g0715 | ATGTCACTCCTTAAACTTGTGCAGCCTGATGTGACGGCGCCTGGTGTGAACGTTATTGCTGCTTACACGGAAGCCGTGAGCCCCACCGGCGAGCCCTTCGACAACAGAACGGCTCCATTCATCACCATGTCCGGCACCTCCATGTCCTGCCCCCACGTCGCCGGACTCGCCGGCCTCCTCCGATCTCTGCATCCTAATTGGAGCCCTTCCGCCATTAAATCCGCAATCATGACCTCTGCCAGAATCAGAGACAACACAATGAAGCCGATGCTCGACGGCGGCACAGACGAACTCGCTCCGGCCACTCCTTTCAGCTACGGCTCCGGCCACATTCGCCCAATCGGAGCCGTCGATCCAGGCCTGGTTTACGATCTGACGCCCGACGATTACTTGGAATTTCTGTGCGCCATCGGATACGATGAGAAGAAGATCAGAGCATTCTCCGACGGTCCGTACAAATGTCCGCCTTCCGCCAGTCTTCTGAACTTCAATTACCCTTCGATCGGAGTTCAGAACATGACCGGAAGCGTTACGGTGACCAGAAGATTGAAGAACGTGGGCACTCCCGGAGTTTACAGAGCCAGAGTTCGGCAGCCGGAAGGAGTTAGGGTTTCGGTGGAGCCGAGATTTCTGAAATTCGATAAAGTTGGAGAGGAGAAGAGCTTCAAATTGACGATCGCCGGAGTTGTGCCGGCCAAACGCGTGGTCGACGGGACGCTGATTTGGACCGACGGCGAGCACTTCGTTAGGAGTCCTATCGTCATTTCTTCCGGCTTGTTCTGA | 783 | 55.68 | MSLLKLVQPDVTAPGVNVIAAYTEAVSPTGEPFDNRTAPFITMSGTSMSCPHVAGLAGLLRSLHPNWSPSAIKSAIMTSARIRDNTMKPMLDGGTDELAPATPFSYGSGHIRPIGAVDPGLVYDLTPDDYLEFLCAIGYDEKKIRAFSDGPYKCPPSASLLNFNYPSIGVQNMTGSVTVTRRLKNVGTPGVYRARVRQPEGVRVSVEPRFLKFDKVGEEKSFKLTIAGVVPAKRVVDGTLIWTDGEHFVRSPIVISSGLF | 260 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 11474195 | 11475420 | - | MC03g_new0253 | Mch3g0715 | 683618 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch3g0715 | 260 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 5 | 254 | IPR045051 | - | |
| Mch3g0715 | 260 | Pfam | Fibronectin type-III domain | 162 | 255 | IPR041469 | - | |
| Mch3g0715 | 260 | Gene3D | - | 134 | 258 | - | - | |
| Mch3g0715 | 260 | Gene3D | Peptidase S8/S53 domain | 6 | 130 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Mch3g0715 | 260 | Pfam | Subtilase family | 7 | 109 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Mch3g0715 | 260 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 117 | - | - | |
| Mch3g0715 | 260 | FunFam | Subtilisin-like protease SBT1.5 | 134 | 258 | - | - | |
| Mch3g0715 | 260 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 45 | 55 | IPR023828 | - | |
| Mch3g0715 | 260 | SUPERFAMILY | Subtilisin-like | 7 | 118 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g0715 | Mch-Chr3:11474195 | Mch4g0363 | Mch-Chr4:2285821 | 2.25E-95 | dispersed | |
| Mch3g0715 | Mch-Chr3:11474195 | Mch2g0997 | Mch-Chr2:6758467 | 1.15E-66 | transposed |
Pathway information