Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0725 ATGGCGTCGAAAACGGGTTCGAAACCTTCTGCAAAGCAAAATAAGGTGATAGCCGATGTTAAAGCGACCGATGCAAGCGATCTAAGGTCCTTACCTTCACAGGCTTCATTGGAAAACAAACTTGGTTCAGCTCTCTCTGGAGATGTATCAAAAAACTCCATACAGAGATCCTCGAATCGGTCTACCTTGACCGATGTGTCTAGTGCTAAATCTTCGAGTTTGAATCCTAAAGAGTCTATTGAGTCTTGTACTCAGAAAGTGAAAGAAAGTTCCTCAAAGCCTGGCCCGAAGACGATGAAAGAAGGAGATCTTGCTCTTGGTGGGACTCGGGCCGCGGCAGAGGACTCTATAGATCAAGAGAAGAAAACATCAGAATGTGGGAGTGGGAAGGACAGTTCTGTTTCTGCTGCCAAAGTAAGTGATGGGACGAACAGTCTTGCCAAGACCAGTGGAAGTGCAAAAATCAGCGACCGTGTCGAGTTAGTCGAGAGTGGCAAGAGCAGTATGTGTCGAGGAAGCACGAGTAGCGATATCAGTGATGAAAGTACCTGTAGCAGCTTCAGTAGTAGTATCAGTAAGCCTCACAAAGCCAATGACTTGAGATGGGAGGCCATCCAAGCTGTACGTGCGAGGGACGGGTTATTGGGATTAGGCCATTTTAGACTGTTGAAGAGACTGGGTTGCGGGGATATCGGAAGCGTCTACCTGTCGGAGTTGAGTGGCACTAAATGTTATTTCGCAATGAAAGTCATGGACAAAGGGTCTCTAGCAAGTCGGAAGAAGTTGCTTCGCGCTCAGACCGAACGAGAAATATTGCAGTCTCTTGATCATCCATTCCTTCCCACATTGTATACCCATTTCGAAACCGATAAGTTCTCGTGCTTGGTGATGGAGTTCTGCCCCGGAGGAGACTTGCACACTCTAAGGCAGAGACAGCAAGGGAAGCATTTTACCGAACAGGCAGTGAAATTTTATGTAGCAGAGGTCCTTCTAGCACTCGAGTATCTTCACATGCTCGGGATCGTATACCGAGACCTTAAGCCTGAAAATGTTCTTGTGAGGGAAGATGGACACATAATGCTTTCGGACTTCGATCTTTCCCTAAGATGTGCTGTTAGTCCGACGTTGGTGAAGGGCTCATGTTCTGAGTCTGAACCCTTGAGAAAGAATCCTGTTTATTGTGTCCAGCCGGCTTGTATCGAACCTTCCTGCATCCAGCCATCTTGTGTAGTTCCCACGACGTGCTTCTCTCCCCGAATCTTTTCTAGCAAGTCGAAGAAGGATAGAAAGCCCAAGACTGAAATAGGAAACCAGGTTACGCCATTGCCAGAGCTCATTGCAGAGCCTACAGAGGCCAGATCAATGTCATTTGTTGGTACACATGAGTATTTGGCACCGGAGATCATAAAGGGTGAAGGTCATGGAAGTGCTGTCGACTGGTGGACTTTCGGAATCTTTTTATACGAACTGTTGTTTGGAAAAACTCCTTTTAAGGGATCTGGGAATCGAGCCACGCTATTTAACGTCGTTGGTCAGCCTTTGCGGTTTCCTGAATCACCAGTTGTAAGTTTTGCTGCTAGGGATCTCATCAGGGGCTTGCTTGTCAAGGAACCACAGCATAGATTAGCTTACAAAAGAGGGGCAACTGAAATCAAGCAACATCCATTTTTTGAAGGTGTCAATTGGGCATTGATACGATGTGCTTCACCACCTGAAGTACCGAAGCCTGTCGAGATCGAGAGGATACCCTCAACAGCACCTCCAGTCAGTGGAAAAGCTGTAATGCCTAGACCTGGTCCTGATTCCAAATCGCCCGATAATTATCTCGAGTTTGATTTCTTTTAG 1845 46.78 MASKTGSKPSAKQNKVIADVKATDASDLRSLPSQASLENKLGSALSGDVSKNSIQRSSNRSTLTDVSSAKSSSLNPKESIESCTQKVKESSSKPGPKTMKEGDLALGGTRAAAEDSIDQEKKTSECGSGKDSSVSAAKVSDGTNSLAKTSGSAKISDRVELVESGKSSMCRGSTSSDISDESTCSSFSSSISKPHKANDLRWEAIQAVRARDGLLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQQGKHFTEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKGSCSESEPLRKNPVYCVQPACIEPSCIQPSCVVPTTCFSPRIFSSKSKKDRKPKTEIGNQVTPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERIPSTAPPVSGKAVMPRPGPDSKSPDNYLEFDFF 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11538666 11542486 + MC03g0468 Mch3g0725 683628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0725 614 Gene3D Phosphorylase Kinase; domain 1 218 303 - -
Mch3g0725 614 Gene3D Transferase(Phosphotransferase) domain 1 451 575 - -
Mch3g0725 614 MobiDBLite consensus disorder prediction 166 193 - -
Mch3g0725 614 PIRSF ILK 81 171 - -
Mch3g0725 614 PIRSF ILK 232 404 - -
Mch3g0725 614 PIRSF ILK 438 546 - -
Mch3g0725 614 PIRSF ILK 41 106 - -
Mch3g0725 614 MobiDBLite consensus disorder prediction 27 92 - -
Mch3g0725 614 SMART serkin_6 220 557 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0725 614 SUPERFAMILY Protein kinase-like (PK-like) 196 589 IPR011009 -
Mch3g0725 614 CDD STKc_phototropin_like 219 580 - -
Mch3g0725 614 MobiDBLite consensus disorder prediction 1 151 - -
Mch3g0725 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g0725 614 MobiDBLite consensus disorder prediction 128 151 - -
Mch3g0725 614 FunFam Serine/threonine-protein kinase D6PK-like 218 303 - -
Mch3g0725 614 Gene3D Transferase(Phosphotransferase) domain 1 304 372 - -
Mch3g0725 614 ProSiteProfiles Protein kinase domain profile. 220 557 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0725 614 Pfam Protein kinase domain 221 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0725 614 Pfam Protein kinase domain 454 557 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0725 614 PANTHER FLIPPASE KINASE 1-RELATED 86 577 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch3g0725 614 MobiDBLite consensus disorder prediction 582 606 - -
Mch3g0725 614 FunFam Serine/threonine-protein kinase AGC1-7 450 575 - -
Mch3g0725 614 FunFam serine/threonine-protein kinase D6PK-like 304 371 - -
Mch3g0725 614 MobiDBLite consensus disorder prediction 167 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0266 Mch-Chr2:2006236 Mch3g0725 Mch-Chr3:11538666 4.68E-175 dispersed
Mch3g0725 Mch-Chr3:11538666 Mch4g0368 Mch-Chr4:2323977 5.22E-97 dispersed
Mch1g0308 Mch-Chr1:6554127 Mch3g0725 Mch-Chr3:11538666 9.67E-185 transposed
Mch3g0955 Mch-Chr3:13419054 Mch3g0725 Mch-Chr3:11538666 4.95E-117 transposed
Mch5g0012 Mch-Chr5:79991 Mch3g0725 Mch-Chr3:11538666 1.11E-227 transposed
Mch8g1468 Mch-Chr8:10997803 Mch3g0725 Mch-Chr3:11538666 6.41E-233 transposed
Mch8g3098 Mch-Chr8:33399904 Mch3g0725 Mch-Chr3:11538666 3.02E-132 transposed
Mch10g1003 Mch-Chr10:7175560 Mch3g0725 Mch-Chr3:11538666 3.22E-101 transposed
Mch1g1680 Mch-Chr1:17579827 Mch3g0725 Mch-Chr3:11538666 4.41E-286 wgd
Mch2g0443 Mch-Chr2:3222422 Mch3g0725 Mch-Chr3:11538666 1.05E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77249 PF00069 Pkinase 2.10E-37 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0725 K08286 - csv:101213662 1055.05