Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0736 CAATCCTTGCTTCCTAACCTGGCCGATTCTGGTAAGAGGAATGCTCTCCAGAGAAGAAAATCTGCCCGTAGTGGTAGTTTTTCACAATTGGTAGAAAATAACAATCAACCACAAATTTGTGATGAAGTGTCTCATCAATCTACGATTGCTCAACAAATCAGTTTTAGGCAAGTGTTTGTTCTTCTGGCCACTTATTTGGGAGGAGGCACACTTTGTTTCTTCCTCGTTCAGGATCAGATCAGCGGCAAGAAAACAAACGGAATTGTTGACGCCCTTTACTTTTGTGTTGTGACAATGACCACTGTTGGATATGGAGATCTTGTTCCTAGTAGCTTAGTTGCAAAACTACTTGCATGTGCTTATGTATTCACTGGAATGACTCTTGGTGGGATGATTCTTAGCAAGGCAGCCGATTACATTGTGGAAAAGCAGGAAATCCTTCTGGTTAAAACTATGTACATGAGGAACAATATTAGCTCCAGTGAGATCGTTCAAGAATCTGAGGCTCACAAACTGAAATACAAATTCATAATGACCGGAATCCTCCTTTGGGCTCTCATAGTTGTTGGAACTCTTTTCTTAACTGCGGTTGAGAAACTAGAGTTCATGGATGCCTTTTATTGCGTTTGTTCCACAATCACTACTCTTGGCTATGGGGATGAGAGCTTCTCTACCTCAGCTGGTCGTGTTTTTGCTGTAATTTGGATATTGAGCAGTACCATCTGCTTAGCTCAGTTCTTTCTGTACCTTGCAGAATTACGCACTGAAAGGAGACAGAAATCACTGGTGAATTGGGTTCTCAACCGAAACCTCACACACTTGGATCTTGAAGAAGCAGACCTTGATCATGATAAAGTAGTAAGTGCTGCAGAATTTGTTCTATATAAGCTGAAGGAAATGGGGAAGATCTGTCAGGAAGATATTTCACCTATACTTGACACCTTTAAGAAGCTTGACATTGATCAATCTGGATCTTTGACAGAAGCTGATTTAGTAACTTCATAG 1005 40.9 QSLLPNLADSGKRNALQRRKSARSGSFSQLVENNNQPQICDEVSHQSTIAQQISFRQVFVLLATYLGGGTLCFFLVQDQISGKKTNGIVDALYFCVVTMTTVGYGDLVPSSLVAKLLACAYVFTGMTLGGMILSKAADYIVEKQEILLVKTMYMRNNISSSEIVQESEAHKLKYKFIMTGILLWALIVVGTLFLTAVEKLEFMDAFYCVCSTITTLGYGDESFSTSAGRVFAVIWILSSTICLAQFFLYLAELRTERRQKSLVNWVLNRNLTHLDLEEADLDHDKVVSAAEFVLYKLKEMGKICQEDISPILDTFKKLDIDQSGSLTEADLVTS 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11629635 11631847 + MC03g0478 Mch3g0736 683639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0736 334 SUPERFAMILY Voltage-gated potassium channels 172 274 - -
Mch3g0736 334 FunFam Calcium-activated outward-rectifying potassium channel 1 52 147 - -
Mch3g0736 334 Pfam Ion channel 61 141 IPR013099 -
Mch3g0736 334 Pfam Ion channel 183 253 IPR013099 -
Mch3g0736 334 SUPERFAMILY EF-hand 268 332 IPR011992 -
Mch3g0736 334 Gene3D - 152 264 - -
Mch3g0736 334 Gene3D - 50 146 - -
Mch3g0736 334 PRINTS Two pore domain K+ channel signature 97 125 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch3g0736 334 PRINTS Two pore domain K+ channel signature 214 223 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch3g0736 334 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 88 308 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(PANTHER)|GO:0071805(InterPro)
Mch3g0736 334 SUPERFAMILY Voltage-gated potassium channels 53 156 - -
Mch3g0736 334 ProSitePatterns EF-hand calcium-binding domain. 319 331 IPR018247 -
Mch3g0736 334 ProSitePatterns EF-hand calcium-binding domain. 280 292 IPR018247 -
Mch3g0736 334 ProSiteProfiles EF-hand calcium-binding domain profile. 306 334 IPR002048 GO:0005509(InterPro)
Mch3g0736 334 Gene3D - 275 334 - -
Mch3g0736 334 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1262 Mch-Chr11:8963483 Mch3g0736 Mch-Chr3:11629635 5.62E-118 dispersed
Mch1g1998 Mch-Chr1:19560765 Mch3g0736 Mch-Chr3:11629635 1.28E-58 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0736 K05389 - csv:101214791 545.814