Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g0736 | CAATCCTTGCTTCCTAACCTGGCCGATTCTGGTAAGAGGAATGCTCTCCAGAGAAGAAAATCTGCCCGTAGTGGTAGTTTTTCACAATTGGTAGAAAATAACAATCAACCACAAATTTGTGATGAAGTGTCTCATCAATCTACGATTGCTCAACAAATCAGTTTTAGGCAAGTGTTTGTTCTTCTGGCCACTTATTTGGGAGGAGGCACACTTTGTTTCTTCCTCGTTCAGGATCAGATCAGCGGCAAGAAAACAAACGGAATTGTTGACGCCCTTTACTTTTGTGTTGTGACAATGACCACTGTTGGATATGGAGATCTTGTTCCTAGTAGCTTAGTTGCAAAACTACTTGCATGTGCTTATGTATTCACTGGAATGACTCTTGGTGGGATGATTCTTAGCAAGGCAGCCGATTACATTGTGGAAAAGCAGGAAATCCTTCTGGTTAAAACTATGTACATGAGGAACAATATTAGCTCCAGTGAGATCGTTCAAGAATCTGAGGCTCACAAACTGAAATACAAATTCATAATGACCGGAATCCTCCTTTGGGCTCTCATAGTTGTTGGAACTCTTTTCTTAACTGCGGTTGAGAAACTAGAGTTCATGGATGCCTTTTATTGCGTTTGTTCCACAATCACTACTCTTGGCTATGGGGATGAGAGCTTCTCTACCTCAGCTGGTCGTGTTTTTGCTGTAATTTGGATATTGAGCAGTACCATCTGCTTAGCTCAGTTCTTTCTGTACCTTGCAGAATTACGCACTGAAAGGAGACAGAAATCACTGGTGAATTGGGTTCTCAACCGAAACCTCACACACTTGGATCTTGAAGAAGCAGACCTTGATCATGATAAAGTAGTAAGTGCTGCAGAATTTGTTCTATATAAGCTGAAGGAAATGGGGAAGATCTGTCAGGAAGATATTTCACCTATACTTGACACCTTTAAGAAGCTTGACATTGATCAATCTGGATCTTTGACAGAAGCTGATTTAGTAACTTCATAG | 1005 | 40.9 | QSLLPNLADSGKRNALQRRKSARSGSFSQLVENNNQPQICDEVSHQSTIAQQISFRQVFVLLATYLGGGTLCFFLVQDQISGKKTNGIVDALYFCVVTMTTVGYGDLVPSSLVAKLLACAYVFTGMTLGGMILSKAADYIVEKQEILLVKTMYMRNNISSSEIVQESEAHKLKYKFIMTGILLWALIVVGTLFLTAVEKLEFMDAFYCVCSTITTLGYGDESFSTSAGRVFAVIWILSSTICLAQFFLYLAELRTERRQKSLVNWVLNRNLTHLDLEEADLDHDKVVSAAEFVLYKLKEMGKICQEDISPILDTFKKLDIDQSGSLTEADLVTS | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 11629635 | 11631847 | + | MC03g0478 | Mch3g0736 | 683639 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g0736 | 334 | SUPERFAMILY | Voltage-gated potassium channels | 172 | 274 | - | - | |
Mch3g0736 | 334 | FunFam | Calcium-activated outward-rectifying potassium channel 1 | 52 | 147 | - | - | |
Mch3g0736 | 334 | Pfam | Ion channel | 61 | 141 | IPR013099 | - | |
Mch3g0736 | 334 | Pfam | Ion channel | 183 | 253 | IPR013099 | - | |
Mch3g0736 | 334 | SUPERFAMILY | EF-hand | 268 | 332 | IPR011992 | - | |
Mch3g0736 | 334 | Gene3D | - | 152 | 264 | - | - | |
Mch3g0736 | 334 | Gene3D | - | 50 | 146 | - | - | |
Mch3g0736 | 334 | PRINTS | Two pore domain K+ channel signature | 97 | 125 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Mch3g0736 | 334 | PRINTS | Two pore domain K+ channel signature | 214 | 223 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Mch3g0736 | 334 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 88 | 308 | IPR003280 | GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(PANTHER)|GO:0071805(InterPro) | |
Mch3g0736 | 334 | SUPERFAMILY | Voltage-gated potassium channels | 53 | 156 | - | - | |
Mch3g0736 | 334 | ProSitePatterns | EF-hand calcium-binding domain. | 319 | 331 | IPR018247 | - | |
Mch3g0736 | 334 | ProSitePatterns | EF-hand calcium-binding domain. | 280 | 292 | IPR018247 | - | |
Mch3g0736 | 334 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 306 | 334 | IPR002048 | GO:0005509(InterPro) | |
Mch3g0736 | 334 | Gene3D | - | 275 | 334 | - | - | |
Mch3g0736 | 334 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1262 | Mch-Chr11:8963483 | Mch3g0736 | Mch-Chr3:11629635 | 5.62E-118 | dispersed | |
Mch1g1998 | Mch-Chr1:19560765 | Mch3g0736 | Mch-Chr3:11629635 | 1.28E-58 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch3g0736 | K05389 | - | csv:101214791 | 545.814 |