Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0802 ATGGAGTTTTCTTCACTACTAATATTTCTACTGTTTTGGAGTTTTTTTCTTCCTTGTTTTACAGAAGAGAGAGAAATCTACTTGGTCTTAATGGAAGACGACGACCCAGTTGCCTTCCACCAAAGTGAGAGGACAACTAGTCCGAGCTTCGAAAGAAACAGCAAAGTTTCAAAAAAGGCAGCACCAAGAGAACTGGAGGGATTCCACGACCAGTTTCTTGAGAAAAGTCTAAGAGTGGAGAGCTACACGAAGCTTCACAGCTTCAAGCACATCATCAATGGGTTCGCGGTCCACACGACGCCATCGGAGGCGAGAAAGCTGAGAGAAGCTGAAGGGGTTGTGGCTGTGGAGAGAGACAGAGGAGTGAGGAAGATGACAACTTACACCCCTCAGTTTCTAGGGGTTCCCTCCACATTAAGGGCAACAGTGGGATGCAAGAGGAATGAAAGTAGTGGTGGAGAGGGGATTGTTATTGGGTTTGTGGACTCTGGGATTGACCCGACACACCCGAGTTTCGGTTTCGGTTTCGGTCTCGGTCTCGACGAGTCTTCTAAGTTTTGTGGGGTTTGTGAGGAAGGTCCTTTTTTTGGTTCAAATTCTTGCAATGGGAAGATTGTGGGAGCAAGATTTTTCTGTGCTGGGGCTCAGGCTGTTTCACAACTCAACTCTTCTGTGGATTTCCTCTCCCCTTTTGATGCTGAAGGCCATGGAAGCCACGTGGCATCTATAGCTGCTGGAAATGCAGGGGTTCCAGTCGTTGTTAATGGTTTTTTCTATGGATTGGCCAGTGGGATAGCGCCACGTGCACGAATTGCTATTTATAAGGCTGTGTATCCAACAGTGGCTACTCTAACAGATGTAGTTGCAGCCATAGATCAAGCAATTATTGATGGAGTTGATATATTGGCATTGTCTGTTGGACCAAATGAACCACCAGAAGTAGGATTTACGTTTCTAAGCATATATGACATTGCTGTATTATCTGCCACACGAGCCGGAATCCTTGTGGTTCAGGCTGCCGGAAATAACGGCCCGGCCCCGTCAACCGTCGTCTCTTACAGCCCTTGGGCTGTCGGCGTGGCCGCTTCCGGCACCGACCGAGTTTATCCGGCCTCACTTCTCCTTGGCAATGGCCAAAACGTTGGAGGCACAGGCTTGTCTGGACCCACTCTGGGGAGTGAGTTTTTGCTACATAAGCTGGTATTGGCCAAGGATGCAGTGAACCAAAATGTGGCACTTCCCACTGAAGAGTGCCAATATCCTCAAGCTTTTGACCCAAATATTGTCCAAAACAGCATAGTAATCTGCTCCTTCTCTCAAGGATTCCTCAATGGAACCTCCACCCTCACAGCTATCCTTCACACTGCAGCAACACTCAGATTCATGGCTTTTGTTCTCGTTGCAAATCCGAGCTATGGCGACTTCATTGCAGAACCCATCCCCTTCAGAATTCCTGGCATTCTCGTCCCGAGCGTTTCAGATTCTCAGGTGATATTGAAGTACTATGAGGAAAATATATGCAAGGATGGGAGGGGAATGGTTACAAACTTTAAAGGCAAAGCAGCCATAGGAGAAGGAAGATTTGCTTCATTTGGGGGCCAAGCTCCCACAGTTAGCAGATTTTCATCAAGAGGACCAGATTACATGAACAGTAATAGGACTGCAGCTGATGTGCTAAAGCCCGATATTCTCGCTCCAGGTCACCAAGTTTGGGCTGCTTGGAGCCCCCTTAGTGCCTCGGAGCCACTTTTAAAGGGATACCATTTTGCACTCTTGTCTGGAACAAGCATGGCAGCACCTCACATTGTGGGAATAGCAGCACTTATCAAGCAAAAGAATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCCACAACTGCTACAAAGTATGATATGAATGGAGAGCTTATTCAGGCAGAGGGATATGGCATTCATAGTTTATATCCTTCTACTCCCTTTGATTTGGGCGCTGGCCTCGTCTCTCCGACCAATGCTTTAGACCCGGGATTGGTCTTCCCATCAGAATATGAAGACTATATAAACTTCTTGTGCTCTTTACCTGGCGTTGATCCTGCTGTCATCAAAAGCACCACTGGAAGACATTGCAATGCCTCTCTCTCACAGCCACACCCAGCAGATCTGAACCTTCCTTCACTCACAATATCATCACTGGTTGGGCAACAGGTGGTGCAGAGAAGAGTGAAGAATGTAGGAGGCAAAGTGGAGACATATGTGTGGTCGGTGATCCCGCCGAACGGGACAACAGTCGACATCAATCCGCCATGGTTCGCCATAGCGCCAGAAGGGGTCCAAAACTTGGAAATACAGATCAATGTCACACATAAAATGGATCACTTTAGCTTTGGGGAGATTGTTTTGACAGGAAGTTTAAACCATATTGCAAGGATCCCTTTGTCAGTTTTGGCTGTTTCTACATCCTAA 2448 47.26 MEFSSLLIFLLFWSFFLPCFTEEREIYLVLMEDDDPVAFHQSERTTSPSFERNSKVSKKAAPRELEGFHDQFLEKSLRVESYTKLHSFKHIINGFAVHTTPSEARKLREAEGVVAVERDRGVRKMTTYTPQFLGVPSTLRATVGCKRNESSGGEGIVIGFVDSGIDPTHPSFGFGFGLGLDESSKFCGVCEEGPFFGSNSCNGKIVGARFFCAGAQAVSQLNSSVDFLSPFDAEGHGSHVASIAAGNAGVPVVVNGFFYGLASGIAPRARIAIYKAVYPTVATLTDVVAAIDQAIIDGVDILALSVGPNEPPEVGFTFLSIYDIAVLSATRAGILVVQAAGNNGPAPSTVVSYSPWAVGVAASGTDRVYPASLLLGNGQNVGGTGLSGPTLGSEFLLHKLVLAKDAVNQNVALPTEECQYPQAFDPNIVQNSIVICSFSQGFLNGTSTLTAILHTAATLRFMAFVLVANPSYGDFIAEPIPFRIPGILVPSVSDSQVILKYYEENICKDGRGMVTNFKGKAAIGEGRFASFGGQAPTVSRFSSRGPDYMNSNRTAADVLKPDILAPGHQVWAAWSPLSASEPLLKGYHFALLSGTSMAAPHIVGIAALIKQKNPSWTPSMIASAMSTTATKYDMNGELIQAEGYGIHSLYPSTPFDLGAGLVSPTNALDPGLVFPSEYEDYINFLCSLPGVDPAVIKSTTGRHCNASLSQPHPADLNLPSLTISSLVGQQVVQRRVKNVGGKVETYVWSVIPPNGTTVDINPPWFAIAPEGVQNLEIQINVTHKMDHFSFGEIVLTGSLNHIARIPLSVLAVSTS 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12104534 12110826 + MC03g0533 Mch3g0802 683705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0802 815 Gene3D - 366 531 - -
Mch3g0802 815 Pfam Fibronectin type-III domain 715 809 IPR041469 -
Mch3g0802 815 ProSitePatterns Serine proteases, subtilase family, histidine active site. 236 246 IPR022398 -
Mch3g0802 815 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 767 IPR045051 -
Mch3g0802 815 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 123 IPR037045 -
Mch3g0802 815 Gene3D - 685 812 - -
Mch3g0802 815 Pfam Subtilase family 153 645 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch3g0802 815 Pfam Peptidase inhibitor I9 57 123 IPR010259 -
Mch3g0802 815 ProSiteProfiles Serine proteases, subtilase domain profile. 136 668 - -
Mch3g0802 815 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Mch3g0802 815 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Mch3g0802 815 PRINTS Subtilisin serine protease family (S8) signature 593 609 IPR015500 -
Mch3g0802 815 Gene3D Peptidase S8/S53 domain 155 681 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch3g0802 815 SUPERFAMILY Subtilisin-like 125 672 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch3g0802 815 CDD PA_subtilisin_like 372 505 - -
Mch3g0802 815 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Mch3g0802 815 ProSitePatterns Serine proteases, subtilase family, serine active site. 594 604 IPR023828 -
Mch3g0802 815 CDD Peptidases_S8_3 122 630 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0802 Mch-Chr3:12104534 Mch8g2621 Mch-Chr8:29456335 2.81E-197 dispersed
Mch3g0802 Mch-Chr3:12104534 Mch2g0997 Mch-Chr2:6758467 2.43E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0802 - - - 0.0