Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0804 GTTGCAGTTCAAGCTTTGCAAGTTATATACACTTCATTGAACAGTCCTCCTCAGCTAACTGGTTGGATTAGTAGCGGCGGCGATCCATGTGCAGAGTCATGGAAAGGGGTGATTTGTGATGGGCCCGCAGTCGTTTCCATCGAGATTTCTGGGTTAGGGCTGAATGGCACGATGGGTTACATGCTATCAAGTTTTTTGTCATTGAAAAAGCTTGATATGAGCGACAACAATATTCACGACACGATCCCTTACCAGTTGCCGCCGAACCTCACAAGCCTAAACATGGCAAAAAACAACTTAAGTGGTAATCTTCCTTATTCCTTTTCCACCATGGCCTCTCTAAATTATCTGAATATGAGCCATAATTTGCTATCCCAGGCGATAGGAGACGTTTTCACCAATCTTACCACCCTAGGGACCTTGGACCTTTCTTTCAACAGCTTTATTGGGGATCTTCCTAATTCCTTGAGCTCATTATCCAATGTTTCTTCCCTCTTTTTGCAGAACAACCAATTGACTGGTTCTCTCAATAGTCTTATCAGTTTGCCTTTGACCACTCTAAATGTGGCAAATAATCATTTCAGTGGATGGATACCAAAAGAACTGAGTTCAATCGAAAATTTCATATATGATGGAAATTCATTTGATAATGGTCCTGCACCTCCTCCACCACCTTTTACTCCACCTCCTCCTGGTAGATCTCGAAATGGCACGAAACATCCAGGATCTGGCAGTGGCACCCATACCGCCCCAAGTTCTGATGGCAGCTCATCCCACTCAAATAAAGGCTTGCCTGTTTTGGCAATAGTGGGGATAATTCTGGGTGCTATAATTTTTGTCCTCATTGTGTTAGTTGCTTTTGCTGTATGCGTCCAGAAGAGAAAACGAAAGAACATCGGTCTTAGAGCTTCCAGTGGAAGGCTCTCTACTGGCACTAGTGTGAATGCTGAGGTGCAAGAGCACCGGGTAAAAAGCGTTGCTGCTGTTGCCGATATTAAGCCTCTACCTGCAGAGAAAATGAATTCTGAGAGATTACAAGCGAAGAATGGATCTGTGAAAAGAATAAAGTCCCCTATTACTTCGACTTCTTACACCGTTGCTTCTCTTCAAAGTGCAACAAATAGCTTTAACCAAGAATGCATAGTTGGTGAAGGTTCTCTTGGCCGTGTTTACAGAGCAGAGTTTCCGAACGGGAAGACAATGGCAATTAAGAAAATCGACAATGCAGCATTGTCACTACAGGAAGAAGACAATTTTCTTGAAGCAGTCTCGAACATGTCAAGATTGAGGCACGCAAACATTGTCACACTAAATGGGTATTGTGCAGAGCATGGGCAGCGTCTTCTAGTTTACGAGTTCATTGGAAATGGAAGTTTACACGACACGCTCCATTTTGCTGAAGATAGTAGTAAGACGCTGACTTGGAATGCACGTGTCCGAGTAGCACTTGGAACCGCTAGAGCTTTAGAATACTTGCATGAGGTTTGCTTGCCTTCTGTTGTACATAGAAACTTGAAGACTGCAAACATATTACTTGATGAAGAGCTCAACCCCCATTTGTCAGATTGCGGTTTGGCTGCTTTAACACCCAACACAGAGCGGCAGGTTTCTACTCAGATGGTTGGTTCCTTCGGCTACAGTGCTCCAGAATTTGCCTTGTCTGGTGTATACACTGTAAAAAGTGATGTGTACAGCTTCGGAGTGGTGATGTTGGAGCTCTTGACCGGCCGAAAGCCACTCGACAGTTCCAGGGTAAGATCGGAGCAGTCACTTGTGAGATGGGCCACTCCCCAACTTCATGATATAGACTCCTTAGCGAAAATGGTAGATCCCACTTTGAACGGAATGTACCCTGCAAAATCTCTGTCACGGTTTGCCGATATCATCGCGCTCTGCGTTCAGCCCGAACCCGAATTTCGACCTCCGATGTCCGAAGTAGTACAAGCCTTGGTGCGTTTAGTACAAAGGGCCAGTGTGGTAAAAAGGCATTCGAGTGACGAGTCGGGTTTCTCTTATAAAACACCCGACCACGATGCAGTCGAGTTGCCATTTTGA 2055 44.96 VAVQALQVIYTSLNSPPQLTGWISSGGDPCAESWKGVICDGPAVVSIEISGLGLNGTMGYMLSSFLSLKKLDMSDNNIHDTIPYQLPPNLTSLNMAKNNLSGNLPYSFSTMASLNYLNMSHNLLSQAIGDVFTNLTTLGTLDLSFNSFIGDLPNSLSSLSNVSSLFLQNNQLTGSLNSLISLPLTTLNVANNHFSGWIPKELSSIENFIYDGNSFDNGPAPPPPPFTPPPPGRSRNGTKHPGSGSGTHTAPSSDGSSSHSNKGLPVLAIVGIILGAIIFVLIVLVAFAVCVQKRKRKNIGLRASSGRLSTGTSVNAEVQEHRVKSVAAVADIKPLPAEKMNSERLQAKNGSVKRIKSPITSTSYTVASLQSATNSFNQECIVGEGSLGRVYRAEFPNGKTMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHANIVTLNGYCAEHGQRLLVYEFIGNGSLHDTLHFAEDSSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDSLAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFSYKTPDHDAVELPF 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12118111 12122662 - MC03g0535 Mch3g0804 683707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0804 684 MobiDBLite consensus disorder prediction 238 259 - -
Mch3g0804 684 ProSiteProfiles Protein kinase domain profile. 376 653 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g0804 684 MobiDBLite consensus disorder prediction 214 259 - -
Mch3g0804 684 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 1 226 - -
Mch3g0804 684 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 341 453 - -
Mch3g0804 684 MobiDBLite consensus disorder prediction 217 235 - -
Mch3g0804 684 Gene3D Ribonuclease Inhibitor 2 224 IPR032675 -
Mch3g0804 684 CDD STKc_IRAK 382 653 - -
Mch3g0804 684 Gene3D Phosphorylase Kinase; domain 1 336 453 - -
Mch3g0804 684 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515(InterPro)
Mch3g0804 684 Gene3D Transferase(Phosphotransferase) domain 1 454 677 - -
Mch3g0804 684 Pfam Leucine rich repeat N-terminal domain 3 40 IPR013210 -
Mch3g0804 684 Pfam Leucine Rich Repeat 184 204 IPR001611 GO:0005515(InterPro)
Mch3g0804 684 Pfam Leucine Rich Repeat 67 86 IPR001611 GO:0005515(InterPro)
Mch3g0804 684 Pfam Protein tyrosine and serine/threonine kinase 380 650 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g0804 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 182 655 IPR046959 -
Mch3g0804 684 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 454 664 - -
Mch3g0804 684 SUPERFAMILY Protein kinase-like (PK-like) 356 650 IPR011009 -
Mch3g0804 684 SUPERFAMILY L domain-like 15 207 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0804 Mch-Chr3:12118111 Mch9g0166 Mch-Chr9:1268020 2.30E-164 dispersed
Mch7g0025 Mch-Chr7:223736 Mch3g0804 Mch-Chr3:12118111 5.10E-37 dispersed
Mch3g0804 Mch-Chr3:12118111 Mch8g1013 Mch-Chr8:7183135 2.38E-180 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77250 PF07714 PK_Tyr_Ser-Thr 6.90E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0804 - - - 0.0