Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g0804 | GTTGCAGTTCAAGCTTTGCAAGTTATATACACTTCATTGAACAGTCCTCCTCAGCTAACTGGTTGGATTAGTAGCGGCGGCGATCCATGTGCAGAGTCATGGAAAGGGGTGATTTGTGATGGGCCCGCAGTCGTTTCCATCGAGATTTCTGGGTTAGGGCTGAATGGCACGATGGGTTACATGCTATCAAGTTTTTTGTCATTGAAAAAGCTTGATATGAGCGACAACAATATTCACGACACGATCCCTTACCAGTTGCCGCCGAACCTCACAAGCCTAAACATGGCAAAAAACAACTTAAGTGGTAATCTTCCTTATTCCTTTTCCACCATGGCCTCTCTAAATTATCTGAATATGAGCCATAATTTGCTATCCCAGGCGATAGGAGACGTTTTCACCAATCTTACCACCCTAGGGACCTTGGACCTTTCTTTCAACAGCTTTATTGGGGATCTTCCTAATTCCTTGAGCTCATTATCCAATGTTTCTTCCCTCTTTTTGCAGAACAACCAATTGACTGGTTCTCTCAATAGTCTTATCAGTTTGCCTTTGACCACTCTAAATGTGGCAAATAATCATTTCAGTGGATGGATACCAAAAGAACTGAGTTCAATCGAAAATTTCATATATGATGGAAATTCATTTGATAATGGTCCTGCACCTCCTCCACCACCTTTTACTCCACCTCCTCCTGGTAGATCTCGAAATGGCACGAAACATCCAGGATCTGGCAGTGGCACCCATACCGCCCCAAGTTCTGATGGCAGCTCATCCCACTCAAATAAAGGCTTGCCTGTTTTGGCAATAGTGGGGATAATTCTGGGTGCTATAATTTTTGTCCTCATTGTGTTAGTTGCTTTTGCTGTATGCGTCCAGAAGAGAAAACGAAAGAACATCGGTCTTAGAGCTTCCAGTGGAAGGCTCTCTACTGGCACTAGTGTGAATGCTGAGGTGCAAGAGCACCGGGTAAAAAGCGTTGCTGCTGTTGCCGATATTAAGCCTCTACCTGCAGAGAAAATGAATTCTGAGAGATTACAAGCGAAGAATGGATCTGTGAAAAGAATAAAGTCCCCTATTACTTCGACTTCTTACACCGTTGCTTCTCTTCAAAGTGCAACAAATAGCTTTAACCAAGAATGCATAGTTGGTGAAGGTTCTCTTGGCCGTGTTTACAGAGCAGAGTTTCCGAACGGGAAGACAATGGCAATTAAGAAAATCGACAATGCAGCATTGTCACTACAGGAAGAAGACAATTTTCTTGAAGCAGTCTCGAACATGTCAAGATTGAGGCACGCAAACATTGTCACACTAAATGGGTATTGTGCAGAGCATGGGCAGCGTCTTCTAGTTTACGAGTTCATTGGAAATGGAAGTTTACACGACACGCTCCATTTTGCTGAAGATAGTAGTAAGACGCTGACTTGGAATGCACGTGTCCGAGTAGCACTTGGAACCGCTAGAGCTTTAGAATACTTGCATGAGGTTTGCTTGCCTTCTGTTGTACATAGAAACTTGAAGACTGCAAACATATTACTTGATGAAGAGCTCAACCCCCATTTGTCAGATTGCGGTTTGGCTGCTTTAACACCCAACACAGAGCGGCAGGTTTCTACTCAGATGGTTGGTTCCTTCGGCTACAGTGCTCCAGAATTTGCCTTGTCTGGTGTATACACTGTAAAAAGTGATGTGTACAGCTTCGGAGTGGTGATGTTGGAGCTCTTGACCGGCCGAAAGCCACTCGACAGTTCCAGGGTAAGATCGGAGCAGTCACTTGTGAGATGGGCCACTCCCCAACTTCATGATATAGACTCCTTAGCGAAAATGGTAGATCCCACTTTGAACGGAATGTACCCTGCAAAATCTCTGTCACGGTTTGCCGATATCATCGCGCTCTGCGTTCAGCCCGAACCCGAATTTCGACCTCCGATGTCCGAAGTAGTACAAGCCTTGGTGCGTTTAGTACAAAGGGCCAGTGTGGTAAAAAGGCATTCGAGTGACGAGTCGGGTTTCTCTTATAAAACACCCGACCACGATGCAGTCGAGTTGCCATTTTGA | 2055 | 44.96 | VAVQALQVIYTSLNSPPQLTGWISSGGDPCAESWKGVICDGPAVVSIEISGLGLNGTMGYMLSSFLSLKKLDMSDNNIHDTIPYQLPPNLTSLNMAKNNLSGNLPYSFSTMASLNYLNMSHNLLSQAIGDVFTNLTTLGTLDLSFNSFIGDLPNSLSSLSNVSSLFLQNNQLTGSLNSLISLPLTTLNVANNHFSGWIPKELSSIENFIYDGNSFDNGPAPPPPPFTPPPPGRSRNGTKHPGSGSGTHTAPSSDGSSSHSNKGLPVLAIVGIILGAIIFVLIVLVAFAVCVQKRKRKNIGLRASSGRLSTGTSVNAEVQEHRVKSVAAVADIKPLPAEKMNSERLQAKNGSVKRIKSPITSTSYTVASLQSATNSFNQECIVGEGSLGRVYRAEFPNGKTMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHANIVTLNGYCAEHGQRLLVYEFIGNGSLHDTLHFAEDSSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDSLAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFSYKTPDHDAVELPF | 684 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 12118111 | 12122662 | - | MC03g0535 | Mch3g0804 | 683707 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g0804 | 684 | MobiDBLite | consensus disorder prediction | 238 | 259 | - | - | |
Mch3g0804 | 684 | ProSiteProfiles | Protein kinase domain profile. | 376 | 653 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch3g0804 | 684 | MobiDBLite | consensus disorder prediction | 214 | 259 | - | - | |
Mch3g0804 | 684 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 1 | 226 | - | - | |
Mch3g0804 | 684 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 341 | 453 | - | - | |
Mch3g0804 | 684 | MobiDBLite | consensus disorder prediction | 217 | 235 | - | - | |
Mch3g0804 | 684 | Gene3D | Ribonuclease Inhibitor | 2 | 224 | IPR032675 | - | |
Mch3g0804 | 684 | CDD | STKc_IRAK | 382 | 653 | - | - | |
Mch3g0804 | 684 | Gene3D | Phosphorylase Kinase; domain 1 | 336 | 453 | - | - | |
Mch3g0804 | 684 | Pfam | Leucine rich repeat | 88 | 147 | IPR001611 | GO:0005515(InterPro) | |
Mch3g0804 | 684 | Gene3D | Transferase(Phosphotransferase) domain 1 | 454 | 677 | - | - | |
Mch3g0804 | 684 | Pfam | Leucine rich repeat N-terminal domain | 3 | 40 | IPR013210 | - | |
Mch3g0804 | 684 | Pfam | Leucine Rich Repeat | 184 | 204 | IPR001611 | GO:0005515(InterPro) | |
Mch3g0804 | 684 | Pfam | Leucine Rich Repeat | 67 | 86 | IPR001611 | GO:0005515(InterPro) | |
Mch3g0804 | 684 | Pfam | Protein tyrosine and serine/threonine kinase | 380 | 650 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch3g0804 | 684 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 182 | 655 | IPR046959 | - | |
Mch3g0804 | 684 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 454 | 664 | - | - | |
Mch3g0804 | 684 | SUPERFAMILY | Protein kinase-like (PK-like) | 356 | 650 | IPR011009 | - | |
Mch3g0804 | 684 | SUPERFAMILY | L domain-like | 15 | 207 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g0804 | Mch-Chr3:12118111 | Mch9g0166 | Mch-Chr9:1268020 | 2.30E-164 | dispersed | |
Mch7g0025 | Mch-Chr7:223736 | Mch3g0804 | Mch-Chr3:12118111 | 5.10E-37 | dispersed | |
Mch3g0804 | Mch-Chr3:12118111 | Mch8g1013 | Mch-Chr8:7183135 | 2.38E-180 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77250 | PF07714 | PK_Tyr_Ser-Thr | 6.90E-44 | CL0016 | Mch | PK |
Pathway information
