Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0840 ATGGCAGCAAAGGACTCGGAGCCAGTATTGGATGTGCAGTCGGTTGTCGAAGCAGTAGTTGCAAACGACGACGCCGATGTTCCCAGCTACGAAGTAGAAAGCCTCTGCATGCGCTGTGAAGAAAACGGGATAACGAGATTTTTGCTGACTTTAATTCCGCACTTCAGAAAGATCTTGCTGTCAGCTTTTGAATGTCCACACTGTGGTGAGAGGAACAATGAAGTTCAGTTTGCCGGTGAGATCCAGCCACGGGGGTGTTGCTACTGTTTGGTGGTTCCTGCTGGCGACCAAAAGATGCTTAATCGACAAGTGGTGAAATCTGAATCTGCCATTATTAAGATACCTGAACTGGATTTCGAGATTCCTGCAGAGGCTCAACGTGGAACTCTTTCAACAGTGGAAGGTATATTGGTACGAGCTGTGGATGGATTGGAAGCCCTTCAAGAGGAACGTAGGAAGGTGGATCCTCAGACTGCTGAAGCAATAGATCAGTTTCTCCTGAAGCTGAAAGCTTGTGCTGTAGGAGACTCATCCTTCTCCTTCATATTGGATGATCCAGCTGGAAACAGCTTCATCGAGAACCCATTTGCACCAGCCAAGGATCCATCATTAAGTATCAAATTCTATGAGCGGACTCCAGAACAACAAGCTTCACTAGGTTATTATGTTGAATCATCACAATCAGAAGAACCCGAGGGTGGAACATCAACAAGTGGTGTTGCTAATTCTAATCAAGCTAGAGGAGAGGCACATGGATCCGTAGGAGCAGTGGCTGGCCATCGAGCAATAGCTCAGAGTAACAGTGCAGAGATTGCTGATGCCTTGTTTCGTTATACTGCACCAGAAGAAGTGATGACTTTTCCAACAACATGTGGAGCTTGTGCGACGATGTGTGAGACTCGAATGTTTGTAACCAAAATTCCTTACTTCCAAGAAGTGATTGTCATGGCATCTACTTGTGATGCTTGTGGTTACCGTAGTTCTGAGTTGAAGCCAGGTGGGCGAATACCTGAAAAAGGAAAGATAACTACTCTTCATGTGAAGGATGTTAGAGATCTCAGTCGAGATGTGATAAAGTCAGATACTGCTAGTGTAAAAGTCCCAGATCTCGACTTGGAGCTGGCTAGTGGCACTCTTGGGGGACTTGTTACAACCGTTGAAGGTTTAATCACAAAAATAAGTGAAAGTCTAGAGAGAGTACATGGATTTACCTTCGGAGACAGTCTAGATGAAAATAAAAAAAACAAATGGCTGGACTTCAAAACAAGACTAACCAAGCTCTTGAGTTTGGAAGAACCTTGGACTCTAATCCTTGACGATGCATTAGCAAACTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACACATGAGGAGTATGAGCGATCCTGGGAACAGAACGAGGAACTTGGTTTGAACGACATGGACACCTCTGCAGCCGATGCTGCTTACGAGTCATAA 1476 44.92 MAAKDSEPVLDVQSVVEAVVANDDADVPSYEVESLCMRCEENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYCLVVPAGDQKMLNRQVVKSESAIIKIPELDFEIPAEAQRGTLSTVEGILVRAVDGLEALQEERRKVDPQTAEAIDQFLLKLKACAVGDSSFSFILDDPAGNSFIENPFAPAKDPSLSIKFYERTPEQQASLGYYVESSQSEEPEGGTSTSGVANSNQARGEAHGSVGAVAGHRAIAQSNSAEIADALFRYTAPEEVMTFPTTCGACATMCETRMFVTKIPYFQEVIVMASTCDACGYRSSELKPGGRIPEKGKITTLHVKDVRDLSRDVIKSDTASVKVPDLDLELASGTLGGLVTTVEGLITKISESLERVHGFTFGDSLDENKKNKWLDFKTRLTKLLSLEEPWTLILDDALANSFIAPVTDDMKDDHQLTHEEYERSWEQNEELGLNDMDTSAADAAYES 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12391426 12401520 - MC03g0565 Mch3g0840 683743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0840 491 FunFam Zinc finger protein ZPR1 335 477 - -
Mch3g0840 491 MobiDBLite consensus disorder prediction 468 491 - -
Mch3g0840 491 Pfam ZPR1 zinc-finger domain 283 338 IPR004457 GO:0008270(InterPro)
Mch3g0840 491 Pfam ZPR1 zinc-finger domain 31 83 IPR004457 GO:0008270(InterPro)
Mch3g0840 491 PANTHER ZINC FINGER PROTEIN ZPR1 11 487 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Mch3g0840 491 NCBIfam ZPR1 zinc finger domain 36 219 IPR004457 GO:0008270(InterPro)
Mch3g0840 491 NCBIfam ZPR1 zinc finger domain 290 481 IPR004457 GO:0008270(InterPro)
Mch3g0840 491 FunFam Zinc finger protein ZPR1 24 79 - -
Mch3g0840 491 FunFam Zinc finger protein ZPR1 280 334 - -
Mch3g0840 491 Pfam ZPR1 jelly-roll domain 99 221 - -
Mch3g0840 491 Pfam ZPR1 jelly-roll domain 352 477 - -
Mch3g0840 491 MobiDBLite consensus disorder prediction 223 252 - -
Mch3g0840 491 FunFam zinc finger protein ZPR1 80 221 - -
Mch3g0840 491 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Mch3g0840 491 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Mch3g0840 491 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Mch3g0840 491 Gene3D ZPR1, A/B domain 335 477 IPR042451 -
Mch3g0840 491 MobiDBLite consensus disorder prediction 223 249 - -
Mch3g0840 491 SMART zpr1 289 449 IPR004457 GO:0008270(InterPro)
Mch3g0840 491 SMART zpr1 34 194 IPR004457 GO:0008270(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0840 K06874 - csv:101208000 874.774