Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0844 TGCACCAACAAAGACAAGGCCTTGCGCCTCAAAATCATTGCCATTTTCTCGATCCTCGTCGCGAGTGTCATCGGCGTTGGCTCGCCGCTTGTCACGCGATCGATCCCGACGTTGCACCCCGATCGGAACCTGTTTATCATCCTCAAATCCTTCGCTGCTGGCATCATTCTCGCAACGGGGTTCATGCACGTCCTACCGGACTCGTTCGATATGCTTTGGTCGAGCTGTCTGAAGGAGAATCCATGGCACAAGTTTCCCTTTTCGGGGTTCGTCGCGATGATGTCAGCGATCGTCACCCTCATGGTGGACTCCATGGCCACAAGTATCTACACCAAGAAGCATAGAGAAATTATGCCTGAGGGTTCTGATCAGAGAGGAGATGATCAAGAGATGGCTGTGGCCAGTGGAGGCCATTTCCACGGCCACCATCATAGAGATGCCAAAGAAATTGGAGCTGGTTCTAAATTGTTGCGTTATTATTGCCATGGTGAGAAGAACAATACTTTTGTTTCTATATGTATTGATTTTTTCTTGATTCAATGTTTGATTAAAAACTTTTGTTTTCAGGTTTTGGAATTGGGAATTGTGGTTCATTCTGTTGTGATTGGACTTTCACTTGGAGCAACAAATGATACTTGCACAATCAAAGGTCTAGTGGCGGCTCTTTGTTTCCATCAAATGTTTGAAGGGATGGGGCTCGGAGGCTGTATTCTTCAGGCAGAATACAAGTGGATGAAGAAGGCAATAATGGCATTCTTCTTCTCAGTGACAACCCCATTTGGGATAGCCCTTGGAATTGGGCTGTCAAGAACATACAAAGAGAACAGCCCCAGTGCCCTAATCACTGTGGGATTGCTGAATGCTTCTTCTGCTGGCCTTCTCATCTACATGGCCTTGGTGGACCTGCTTTCTGCTGACTTTATGAGCCCTAAATTGCAGGGCAGCATCAAACTTCAGCTCAAATCCTATGTTGCTGTGCTCTTGGGGGCTGGAGCCATGTCCTTAATGGCCAAGTGGGCTTGA 1023 47.31 CTNKDKALRLKIIAIFSILVASVIGVGSPLVTRSIPTLHPDRNLFIILKSFAAGIILATGFMHVLPDSFDMLWSSCLKENPWHKFPFSGFVAMMSAIVTLMVDSMATSIYTKKHREIMPEGSDQRGDDQEMAVASGGHFHGHHHRDAKEIGAGSKLLRYYCHGEKNNTFVSICIDFFLIQCLIKNFCFQVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMAFFFSVTTPFGIALGIGLSRTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMSPKLQGSIKLQLKSYVAVLLGAGAMSLMAKWA 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12453090 12456652 + MC03g0569 Mch3g0844 683747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0844 340 Pfam ZIP Zinc transporter 9 337 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Mch3g0844 340 PANTHER ZINC/IRON TRANSPORTER 4 339 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Mch3g0844 340 NCBIfam ZIP zinc/iron transport family 1 340 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1881 Mch-Chr1:18823366 Mch3g0844 Mch-Chr3:12453090 1.03E-118 dispersed
Mch3g0844 Mch-Chr3:12453090 Mch4g0019 Mch-Chr4:137587 6.81E-98 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0844 K14709 - csv:101221552 552.362