Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0932 ATGTCTCTGCTCAGACCTTACGGTAAGGTCGACGAAACCGACCAGCTGAGGCTCGACGCTTCCCGGAGGACCCGGAAGAGGATTGCTGTCATTGTGCTGTCCTCTGTTGTTCTTGTTGCTGTTGTTGTTGCTGTTGTGTTTGGGACTAGAAATGGTTCTAAGGATGATGGCAATGGCAATGGCAATGGCAATTCTGCTCTTTCAAGTTCCATCAAAGCAGTTTGTGATGTTACTTTGTATCCGGAGACGTGTAACTATGCTTTCGGACCTTTGTCTAACTCGAGCCGCCTCGACCCGGGCCAGATCTGCAAGCTTTCGGTTCAACTGGCGCTTGGCGAACTGTCGCGAGCAGCCGACTATGTTTTCAAGCATGCCATTACCAATTCAACTGACAATAGAACCAAATTGGCTTTGGAAAGTTGCCATGAACTTTTGGACTTGGCATTGGATCATTTGAATATCTCACTCTCTTCTACTGAAATTACATTGCTGAAAGCTGTGGATGATCTTAAAACATGGCTAACTTCGGCTGCTACTTACCAGCAGACGTGCATTGAAGGCCTCGAGGAAGTCGATCCGACTTTGAGGAACAGCATTGCCAATTACTTGAAGAACTCTACTGAATTGACAAGCAATGGCCTTGCCATTGTGTCATTCTTTTCGAAAATTACGGATTCGCTCAATCTACGGCGGTTGATGAGTTATGAGAATCATCAGAGCAGTGCAGATTGGGCACGCCCGATACTCCGAAAGCTCGCTCAGCGTGATCTTAGGAAGCAGGCTGACATCGTTGTGGCGAAAGACGGTTCGGGGAAGTACAAGACAATCAGTGCTGCTCTCAAGGCAGTTCCTGACAAGAGCAAGAAGAGCACTGTGATTTATGTGAAGAAGGGAACTTACAAGGAGAATGTTGAAGTTGGGAAGAACAAATGGAATGTGGTGATGATTGGTGATGGAATGAATGCCACCACTGTAACTGCCAAACTCAATTTCATAGATGGGACTCCAACATTTTCATCTGCAACATTTGCTGCAAAGGGCAAAGGCTTTATTGCCATAGACATGGGTTTCCAGAACATCGCTGGACCGAGCAAACACCAGGCGGTCGCCCTGATGTCAACCTCGGACCAATCGATCTTCTACCGCTGTAAAATGGATGCATACCAAGACACTCTCTACGCACACTCGAACCGTCAATTCTACCGCGAATGCACGGTCGAGGGCACGGTTGATTTCATCTTTGGTAACTCAGCAGTAGTTCTGCAGAACTGCACCATTTTGCCCAAGTTGCCTCTTTTAGGCCAAAAGAACACAATCACTGCTCAAGGCCGGTTTGATCCTAACCAAAACACTGGCATTTCCATACAAGACTCTTCCATCACACCATACGAGAACTTGAAAGCTACCGAAACGTACCTCGGTCGTCCGTGGAAGAACTACTCAACGACGGTATTCATGCAGAACTACCTCGGGAGCCTGATTCAGCCAACTGGGTGGCTGCCATGGGTAGGAACATCAGCACCAGACACCATATTCTATGCAGAGTTCCAAAACTATGGCCCTGGTTCTTCCACAGCCAAAAGGGTCAAATGGAAGGGTGTGAGGAATATTGACAACAAAACTGCCAAAAAGTTCACAGTTTCATCCTTCATTGATGGTAAAGATTGGATCTCAAAGGCACAAGTGCCCTTCAAATCTGGCCTC 1704 47.18 MSLLRPYGKVDETDQLRLDASRRTRKRIAVIVLSSVVLVAVVVAVVFGTRNGSKDDGNGNGNGNSALSSSIKAVCDVTLYPETCNYAFGPLSNSSRLDPGQICKLSVQLALGELSRAADYVFKHAITNSTDNRTKLALESCHELLDLALDHLNISLSSTEITLLKAVDDLKTWLTSAATYQQTCIEGLEEVDPTLRNSIANYLKNSTELTSNGLAIVSFFSKITDSLNLRRLMSYENHQSSADWARPILRKLAQRDLRKQADIVVAKDGSGKYKTISAALKAVPDKSKKSTVIYVKKGTYKENVEVGKNKWNVVMIGDGMNATTVTAKLNFIDGTPTFSSATFAAKGKGFIAIDMGFQNIAGPSKHQAVALMSTSDQSIFYRCKMDAYQDTLYAHSNRQFYRECTVEGTVDFIFGNSAVVLQNCTILPKLPLLGQKNTITAQGRFDPNQNTGISIQDSSITPYENLKATETYLGRPWKNYSTTVFMQNYLGSLIQPTGWLPWVGTSAPDTIFYAEFQNYGPGSSTAKRVKWKGVRNIDNKTAKKFTVSSFIDGKDWISKAQVPFKSGL 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13211601 13213391 - MC03g0621 Mch3g0932 683835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0932 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 221 IPR035513 -
Mch3g0932 568 CDD PMEI-like_3 73 222 - -
Mch3g0932 568 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Mch3g0932 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 220 IPR035513 -
Mch3g0932 568 FunFam Pectinesterase 256 568 - -
Mch3g0932 568 Pfam Pectinesterase 262 553 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch3g0932 568 PANTHER PECTINESTERASE 27 558 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch3g0932 568 Pfam Plant invertase/pectin methylesterase inhibitor 69 216 IPR006501 GO:0004857(InterPro)
Mch3g0932 568 Gene3D - 257 568 IPR012334 -
Mch3g0932 568 SMART PMEI_2 66 216 IPR006501 GO:0004857(InterPro)
Mch3g0932 568 ProSitePatterns Pectinesterase signature 1. 287 306 IPR018040 -
Mch3g0932 568 FunFam Pectinesterase 67 221 - -
Mch3g0932 568 NCBIfam pectinesterase inhibitor domain 64 217 IPR006501 GO:0004857(InterPro)
Mch3g0932 568 SUPERFAMILY Pectin lyase-like 260 566 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0932 Mch-Chr3:13211601 Mch7g1197 Mch-Chr7:15639105 2.38E-137 dispersed
Mch3g0932 Mch-Chr3:13211601 Mch8g1006 Mch-Chr8:7149800 8.01E-152 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0932 - - - 0.0