Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1015 ATGCCATGTTCTTCTTCCAGCTGCTTCTGCACGAAGCACTTCTTCAAGCGCTTCTTCACCCATGAGGAGTTCCAAATGGCGGACGGCGTTCTCCACACTACTTTCTTTGCCCCTCATCTCTTGCCCTCCCTCGGCGCCACCATCAATCAAACAACCAAGCTCCGTAAACGCATCGTTTCCCCTTTCGACCCCCGCTATCGAGCTTGGGAGATGTGGCTGGTGGTTCTGGTGATCTATTCAGCATGGATTTGTCCATTTGAGTTTGCGTTTCTTCCTTACAAGCAAAATGCTCTCTTCATCTTCGACCACATCGTCAATGCCTTCTTCGCCGTCGATATCCTTTTAACTTTCTTCGTCGCCTATCTCGATACCCACTCCTATCTTCTCGTCGACAACCCCAAAAGAATTGCACTCAGGTATTTATCTACGTGGTTCGTTTTCGACGTGTGCTCGACCGCGCCGTTGCAGTCGATAAGTTTCTTGTTCACGAACCGGAGCGGGGAAGTTGGGTTCAAGCTTCTGAACATGCTCCGGCTATGGCGCCTCCGACGGGTCAGCTCTCTCTTCGCAAGGCTAGAGAAGGACATCCGGTTCAATTATTTCTGGACCCGTTGCACAAAGCTCATTTCTGTTACATTATTTGCAGTGCACTGTGCAGGGTGCTTCAATTTCGTAATAGCAGACAAATATCCAGACCCAAAAAGGACATGGATTGGTGCAGTGAACCCAAATTTTAAGAACGACAGCCGATGGAACCTCTACATAACTTCAATTTACTGGTCCATCACCACCTTAACCACCACTGGCTATGGCGATCTCCACGCTGAGAACCCTAGAGAGATGCTCTTCGACATCTTCTATATGCTCTTCAACTTAGGTTTGACTTCGTATCTTATCGGAAACATGACCAATCTCGTCGTCCACTGGACTAGCCGCACACGAAACTTCAGGGATTCGGTTCGAGCTGCAACAGAGTTTGCATCGAGAAACCAGCTACCGGGTCGGATTCAAGATCAGATGTTGTCACACATATGTCTGAAGTTCAAAACCGAGGGGCTGAAACAACAAGACACCTTGAACGACCTTCCAAAAGCCATTAGAGCTTCCATAGCTCACTATCTCTTCTACCCCATTCTTCTTCAGGTCTATCTTTTTCAAGGAGTTTCTCATGACTTTCTTTTCCAACTGGTATCAGATGTGGAGGCTGAGTACTTTCCACCAAAGGAAGATGTTATACTCCAAAATGAGGCTCAAACTGATCTTTATGTATTGGTCTCAGGCAGTGTGGATCTAATATCCAATATTGATGGGCATGATCGAGTTATGGGACAAGCAACAGCAGGAGACATGTTTGGAGAGTTGGGAGTGTTGTGTCAAAGGCCACAGCCTTTCACAGTTCGAACCACAAAGCTTTCACAAATTTTAAGGCTCAAGAGAACTTCTTTGTTGTACATAATACAATCAAATACAGAAGATGGCAACTTTATAATGAACAACTTTTTCATGAAAATGAAGCAATATGAAAGAATGGGCAATATATGCAGTAGTTTAGATGAATATAGAATAGAGTTTGATGAGCTAGAAGGAGCTGAAAGGGACATTTTTCCTCAAAACAAACAAGCAAGATCAAATGGGGGTCCTTCAGATTTTGTAGTCTCCTCCTTAGAAAATTTGTCAACCGCGACGGCCTCTTGCTCGAGTGTCGTCTCTAGACAAACCAAGAGAAGGGTTACCATACACATGCTGCCTCGACATGGAACCGAAGAAGTTAAAAGTCAATATGGAAAGTTAATATTTATCCCTGATTCAATAGAAGAGCTCCGCAAGATGGCGAGTGAAAAGTTTGGAGGAGAAATGGCTACAAAAGTGTTGAGTGCAGATAATGCGGAAATTGATGATATAAGTGTGATTCGTGATGGTGACCATTTGTTTCTTCTTTATAATGATATTGAAAAT 1956 44.38 MPCSSSSCFCTKHFFKRFFTHEEFQMADGVLHTTFFAPHLLPSLGATINQTTKLRKRIVSPFDPRYRAWEMWLVVLVIYSAWICPFEFAFLPYKQNALFIFDHIVNAFFAVDILLTFFVAYLDTHSYLLVDNPKRIALRYLSTWFVFDVCSTAPLQSISFLFTNRSGEVGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNFVIADKYPDPKRTWIGAVNPNFKNDSRWNLYITSIYWSITTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYLIGNMTNLVVHWTSRTRNFRDSVRAATEFASRNQLPGRIQDQMLSHICLKFKTEGLKQQDTLNDLPKAIRASIAHYLFYPILLQVYLFQGVSHDFLFQLVSDVEAEYFPPKEDVILQNEAQTDLYVLVSGSVDLISNIDGHDRVMGQATAGDMFGELGVLCQRPQPFTVRTTKLSQILRLKRTSLLYIIQSNTEDGNFIMNNFFMKMKQYERMGNICSSLDEYRIEFDELEGAERDIFPQNKQARSNGGPSDFVVSSLENLSTATASCSSVVSRQTKRRVTIHMLPRHGTEEVKSQYGKLIFIPDSIEELRKMASEKFGGEMATKVLSADNAEIDDISVIRDGDHLFLLYNDIEN 652
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 13843360 13848619 - MC03g0697 Mch3g1015 683918
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1015 652 Gene3D Jelly Rolls 377 512 IPR014710 -
Mch3g1015 652 Pfam Cyclic nucleotide-binding domain 403 489 IPR000595 -
Mch3g1015 652 Gene3D - 67 307 - -
Mch3g1015 652 SMART cnmp_10 384 501 IPR000595 -
Mch3g1015 652 ProSiteProfiles cAMP/cGMP binding motif profile. 384 503 IPR000595 -
Mch3g1015 652 FunFam Potassium channel KAT2 372 508 - -
Mch3g1015 652 SUPERFAMILY Voltage-gated potassium channels 61 306 - -
Mch3g1015 652 PANTHER POTASSIUM CHANNEL AKT1 31 508 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Mch3g1015 652 CDD CAP_ED 384 497 IPR000595 -
Mch3g1015 652 ProSiteProfiles KHA domain profile. 576 652 IPR021789 -
Mch3g1015 652 Gene3D Helix hairpin bin 308 374 - -
Mch3g1015 652 Pfam KHA, dimerisation domain of potassium ion channel 575 645 IPR021789 -
Mch3g1015 652 SUPERFAMILY cAMP-binding domain-like 311 500 IPR018490 -
Mch3g1015 652 Pfam Ion transport protein 66 313 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch3g1015 652 PRINTS EAG/ELK/ERG potassium channel family signature 254 271 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Mch3g1015 652 PRINTS EAG/ELK/ERG potassium channel family signature 113 122 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Mch3g1015 652 PRINTS EAG/ELK/ERG potassium channel family signature 298 307 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Mch3g1015 652 PRINTS EAG/ELK/ERG potassium channel family signature 79 86 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Mch3g1015 652 PRINTS EAG/ELK/ERG potassium channel family signature 280 291 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Mch3g1015 652 PRINTS EAG/ELK/ERG potassium channel family signature 102 112 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Mch3g1015 652 FunFam Potassium channel KAT3 68 308 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0545 Mch-Chr10:3574706 Mch3g1015 Mch-Chr3:13843360 2.80E-172 dispersed
Mch11g0596 Mch-Chr11:3822867 Mch3g1015 Mch-Chr3:13843360 2.49E-173 dispersed
Mch3g1015 Mch-Chr3:13843360 Mch6g0758 Mch-Chr6:5208408 7.12E-205 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1015 K21867 - csv:101215858 1008.44