Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1035 ATGGTAGTCGAAGAGACGATCAAAGCTACAACCGCAGAAGATCTTTCTAATTCCATCGCAAATCCAAACCCTAAGGGACGAGGCGGTGACGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGGGACGACGACCTCGACTCCTCCAATTCTTCGGCGGCGATAGTGCACCAGCCCCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCCTCTGCCAAGTCCAAGCAAGCCACTTGGGGTGCGTCTATCCGGCCGATCTATACGTTCTCTACTGTTGAGGAGTTCTGGAGTGTTTACAACAATATTCACCATCCAAGCAAATTGGCAATGAGGGCAGATTTGTACTGTTTTAAACATAAAATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGAAAATCTGATAATGGATGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCAGTTGTTAATGTTAGATCTGGGCAGGACAAGATATCGATTTGGACAAAGAATGCTTCGAACGAAGCTGCTCAGGCGAGCATTGGAAAACAGTGGAAGGAGTTCCTTGATTACAATGACAGCATCGGCTTTATATTCCACGATGATGCGAAGAAATTCGACAGACATGCGAAAAACCGATATTCAGTATGA 708 46.61 MVVEETIKATTAEDLSNSIANPNPKGRGGDEDEELEEGEIVGDDDLDSSNSSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYSV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14005537 14008441 + MC03g0716 Mch3g1035 683938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1035 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Mch3g1035 235 FunFam Eukaryotic translation initiation factor 4E 51 235 - -
Mch3g1035 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Mch3g1035 235 MobiDBLite consensus disorder prediction 1 52 - -
Mch3g1035 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 43 228 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Mch3g1035 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Mch3g1035 235 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1035 Mch-Chr3:14005537 Mch7g0920 Mch-Chr7:13693202 1.29E-76 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1035 K03259 - csv:101206312 451.44