Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g1040 | ATGCTGTCAAACAACCATAGCTGCAGTCCTCCTACTCCTAGAACTAGATTGGAAAGGCTTCTTAGGGAAAGAGAGCTCAGGAGATCAAACCGGTCTTCTTCTCTCAATGAGGAGGCACGAGATGGTTATAGTCTGGGAGAAGTCAACAGCAGCGATCTCTTCACAAACTTTGGTGGAAGTTATGGGTCATTTTACGAGGAAGACATCTTGGAAGGCGTGTCAGTGGCAAAAGACTTCAGTGATGCATTACAAAGGCCAGAAGGGAGGTATTCTAAGCAACGCCTTCTAGTTGTAGCTAATAGGTTGCCTGTGTCTGCTGTTAGGAGAGGGAAGGAAACATGGCATCTTGAAATTAGCGTTGGTGGTCTAGTCAGTGCACTTTTAGGACTAAAGGAATTTGAGGCAAGATGGATTGGTTGGGCTGGTGTGAATGTCCCGGATGAAGCCGGACAGAGAGCCCTAGAGAAAGCATTAGCTGAAAAGAAATGCATACCAGTCTTTCTTGACGAGGAGATAGTTCATCAGTATTACAATGGCTACTGTAACAACATCTTGTGGCCACTATTTCATTATCTTGGTCTTCCACAAGAAGATCGCCTTGCAACAACGCGTAGTTTTCAGTCACAGTTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTTGTAAACAAATATTACGAAGAGGGAGATGTTGTTTGGTGTCATGATTATCACTTGATGTTTCTCCCAAAGTGTCTTAAAGAGCATAATAATAAGATGAAAGTTGGTTGGTTCCTTCACACCCCATTTCCATCCTCAGAAATACATAGAACTCTGCCATCTCGTACAGAGCTTTTGAGATCTGTTCTGGCAGCCGATTTAGTTGGTTTCCACACATATGATTATGCTAGGCATTTTGTCAGTGCCTGCACCCGTATTCTTGGATTGGAGGGTACACCTGAAGGAGTAGAGGATCAAGGAAAACTGACTCGCATAGCTGCTTTTCCTATTGGAATAGATTCTGACCGATTCATTCGAGCTCTTAAACTCCCTCAAGTCCAGGATCATGTTAAAGAACTTCAAGAAAGATTTGCTGGACGAAAGGTAATGCTGGGTGTTGATCGTCTTGATATGATTAAGGGAATACCTCAAAAGATTTTGGCATTCGAAAAGTTTCTTGAAGAAAATCCAAAGTGGCGTGATAGAGTAGTTTTGCTGCAGATTGCGGTGCCAACAAGAACAGATGTTCGTGATTATCAAAAGCTAACGAGTCAGGTTCATGAGATTGTTGGGCGCATAAATGGGAGATTTGGCACTCTTACTGCAGTTCCAATACATCATCTGGATCGTTCGCTTGACTTCCATGCATTATGTGCTTTATACGCTGTTACTGATGTGGCACTAGTTACATCGTTAAGAGATGGAATGAATCTCGTGAGCTACGAGTTTGTGGCCTGTCAAGCTTCCAAGAAAGGCGTTCTTATCCTAAGTGAGTTTGCAGGTGCAGCCCAATCATTAGGTGCTGGTGCTGTTTTAGTTAATCCATGGAATATCACTGAAGTTGCTGCTTCAATTGGTTATGCTTTGAATATGGAAGCAGATGAAAGAGAAAGACGACACCATCATAACTTCATGCACGTTACAACTCACACATCCCAAGAATGGGCTGCAACATTTGTGAGCGAACTCAATGATACAATAGTTGAAGCTCAGATCAGGACAAGACAGATACCACCTTTACTTCCAACTAGAGAGGCAGTGAATCGTTATGTTCAATCACATAACCGATTGGTTATTCTGGGTTTCAATGCTACCTTAACTGAAGCAGTGGATGCCCTTGGGAGAAGATATGGCCAAATAAGAGACATGGATCTTAAAGTACATCCAGACGTGAGAGAACCGTTGAAGAAACTTTGTGACGACCCGAATACGACGGTGGTTGTCCTCAGTGGAAGTGACAGAAGTGTCCTGGATGATAACTTCGGTGACTACAACATGTGGCTGGCAGCGGAAAATGGGATGTTCTTACGTCCTACTAAGGGAGAGTGGATGACAACAATGCCTGAAAATTTACATATGGACTGGGTGGAGAGCGTTAAGCATGTTTTCGAGTATTTCACTGAAAGAACTCCTCGATCTCATTTCGAGCTTCGCGAAACTTCTCTTCAGTGGAACTACAAGTTTGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGGGATTTGCTGCAGCATCTTTGGACTGGTCCAATCTCAAATGCCTCAGTTGATGTTGTCCAAGGCAGCCGATCAGTCGAGGTCCGAGCAGTTGGTGTGACAAAGGGTGCTGCCATTGATAGAATCTTGGGAGAAATAGTTCGTGATAAAGGCACAAACCAGCCTATTGACTACGTTCTTTGTGTTGGACACTTCCTAACCAAGGATGAAGACGTCTATACATTTTTCGAGCCCGACCTACCTTCCGAAGTGCCGCCTACAGCAAGAGCAACAGTCACCACCAACCCTTTTGGAGTACCAGTGCCAAAGCTCCCAAACAGTGGAGTCCCGCCCAAGTCGACGACGACACGCCTCAAGAAACAGCGTTCCCTTTCTGTTTTAGAAAGAAGAGCAAACAGCCACGGCAGTGCAGTGTTTTGGAGGCCTATAATGCAGGACCGATTGTCGCTGCACGAGGGCTCGTCCGTTCTTGATCTCAAGGGTGACAATTACTTCTCCTGTGCTGTAGGGCGGAAGCGGTCGAATGCGAGATATCTTCTCGGATCATCGGATGATGTCGTCAAACTTGTGAAGGAGCTGGCCGAATGTTCAGCTTCAAGTTGA | 2802 | 44.65 | MLSNNHSCSPPTPRTRLERLLRERELRRSNRSSSLNEEARDGYSLGEVNSSDLFTNFGGSYGSFYEEDILEGVSVAKDFSDALQRPEGRYSKQRLLVVANRLPVSAVRRGKETWHLEISVGGLVSALLGLKEFEARWIGWAGVNVPDEAGQRALEKALAEKKCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNKYYEEGDVVWCHDYHLMFLPKCLKEHNNKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRIAAFPIGIDSDRFIRALKLPQVQDHVKELQERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPKWRDRVVLLQIAVPTRTDVRDYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAVLVNPWNITEVAASIGYALNMEADERERRHHHNFMHVTTHTSQEWAATFVSELNDTIVEAQIRTRQIPPLLPTREAVNRYVQSHNRLVILGFNATLTEAVDALGRRYGQIRDMDLKVHPDVREPLKKLCDDPNTTVVVLSGSDRSVLDDNFGDYNMWLAAENGMFLRPTKGEWMTTMPENLHMDWVESVKHVFEYFTERTPRSHFELRETSLQWNYKFADVEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVRDKGTNQPIDYVLCVGHFLTKDEDVYTFFEPDLPSEVPPTARATVTTNPFGVPVPKLPNSGVPPKSTTTRLKKQRSLSVLERRANSHGSAVFWRPIMQDRLSLHEGSSVLDLKGDNYFSCAVGRKRSNARYLLGSSDDVVKLVKELAECSASS | 933 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 14029602 | 14039416 | - | MC03g0721 | Mch3g1040 | 683943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g1040 | 933 | MobiDBLite | consensus disorder prediction | 827 | 848 | - | - | |
Mch3g1040 | 933 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like | 341 | 543 | - | - | |
Mch3g1040 | 933 | CDD | HAD_TPP | 592 | 812 | - | - | |
Mch3g1040 | 933 | Gene3D | Glycogen Phosphorylase B; | 87 | 340 | - | - | |
Mch3g1040 | 933 | Gene3D | - | 684 | 764 | - | - | |
Mch3g1040 | 933 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 618 | 687 | - | - | |
Mch3g1040 | 933 | CDD | GT20_TPS | 94 | 559 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch3g1040 | 933 | Pfam | Trehalose-phosphatase | 617 | 817 | IPR003337 | GO:0005992(InterPro) | |
Mch3g1040 | 933 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 87 | 928 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Mch3g1040 | 933 | Pfam | Glycosyltransferase family 20 | 94 | 559 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch3g1040 | 933 | Gene3D | Glycogen Phosphorylase B; | 341 | 543 | - | - | |
Mch3g1040 | 933 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 86 | 340 | - | - | |
Mch3g1040 | 933 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 93 | 562 | - | - | |
Mch3g1040 | 933 | NCBIfam | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 94 | 559 | IPR012766 | GO:0003825(InterPro)|GO:0005992(InterPro) | |
Mch3g1040 | 933 | SUPERFAMILY | HAD-like | 592 | 927 | IPR036412 | - | |
Mch3g1040 | 933 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 684 | 764 | - | - | |
Mch3g1040 | 933 | Gene3D | - | 618 | 807 | IPR023214 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0982 | Mch-Chr11:6719969 | Mch3g1040 | Mch-Chr3:14029602 | 0 | dispersed | |
Mch3g1040 | Mch-Chr3:14029602 | Mch9g1356 | Mch-Chr9:15890577 | 2.80E-136 | dispersed | |
Mch3g1040 | Mch-Chr3:14029602 | Mch4g0135 | Mch-Chr4:891787 | 1.00E-135 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch3g1040 | K16055 | - | csv:101213690 | 1688.7 |