Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g1085 | ATGGCAGAGAGAAAGATGAACAAAAATCAAGATGATGGGGCTGGAATTAAGCTTTTTGGGGCAACAATTTTGCTGCAGAGCAGGCAAGTAGTGAAAGAAGAGGCTGATCAACAAACGCCGGAAAAAAAGCCGGCGCCGGCGCCGGAGAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTATTTCAATAATTATAATGTCAATCAGCCAAGGCATTTCTGTAAGGGCTGTCAGAGGTACTGGACCGCCGGCGGAGCACTCCGCAACGTCCCCGTCGGAGCTGGCCGCCGCAAGACCAAGCCGCCCTGCCGGACCTTTTCTGGGTTGCCGGATAATTGCGTCTTTGACTCTTCTGGGATGGTCGCCGCGGCGGTGCAGCAGTTTGAATTGGACGGCATGGTGGACGAGTGGCATGTCGTCGCCGCAGACGGCGGTTTCCGGCGAATTTTGCCAGTCAAGAGGCGGAGGGATTGCCAAGACGGTCAAACCTGT | 507 | 53.85 | MAERKMNKNQDDGAGIKLFGATILLQSRQVVKEEADQQTPEKKPAPAPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFSGLPDNCVFDSSGMVAAAVQQFELDGMVDEWHVVAADGGFRRILPVKRRRDCQDGQTC | 169 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 14318720 | 14319226 | + | MC03g0754 | Mch3g1085 | 683988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g1085 | 169 | ProSiteProfiles | Zinc finger Dof-type profile. | 52 | 106 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Mch3g1085 | 169 | PANTHER | CYCLIC DOF FACTOR 2 | 32 | 106 | IPR045174 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0006355(InterPro) | |
Mch3g1085 | 169 | Pfam | Dof domain, zinc finger | 50 | 105 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Mch3g1085 | 169 | ProSitePatterns | Zinc finger Dof-type signature. | 54 | 90 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g1085 | Mch-Chr3:14318720 | Mch8g1769 | Mch-Chr8:17308233 | 2.01E-34 | dispersed | |
Mch1g1938 | Mch-Chr1:19214808 | Mch3g1085 | Mch-Chr3:14318720 | 5.84E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43034 | PF02701 | zf-Dof | 5.50E-32 | No_clan | Mch | TF |
Pathway information
