Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1101 ATGCCAGCCCCTCCGCCAACTTCAATTTCTTCTTCCCCTCTCTCTCTCCTCTGTTTTCTCACTCTGCTTCTCGTGTTCCACCACACACCATCAAAATGTGCAGCAGCGGCAGCAGCTAAACGAGCCCCCGCCCGCCGCCCACGCCTGCTCTCCGTGGACTACTACAACAAAACATGCCCACACCTCGAGCAACTCGTCTCCTCCATCACCAATCAACAGTTCAGAGACGCACCAGTCTCTGCTCCAGCAACCCTCCGCCTCTTCTTCCATGATTGTTTTGTTGAAGGCTGTGATGGGTCGATTCTGATATCGACGAAGCCGGGCAGCAAAATGGCGGCGGAGAAAGACGCAGAGGACAACAAGGGGCTGAGGGAAGAAGGGTTCGAGAGCATCAAGAAGGCCAAGGCGTTGGTGGAGAGCAAGTGCCCTGGCGTTGTGTCTTGTGCTGACATCCTCGCAATTGCAGCCAGAGATTTCATCCACTTGGCGGGAGGGCCGTATTACCAGGTGAAGAAGGGACGGTGGGATGGGAAGATATCAATGGCGTCTCGAGTAGGTTCCAATCTGCCGCGAGCAAATTCCACCGTCGATCAGCTTCTCAAACTCTTCAATTCCAAAGGCTTGTCAGCCGATGACCTCGTCGTCCTCTCCGGTGCGCATACGATCGGATTTGCGCATTGTGAGAACTTCATCAGCCGTCTCTACGACTACCGAGGCACGAAGCAACCAGATCCGGCGATCGACGGCAGGCTGCTGAAGGCGCTAAAAATGTCGTGCCCTCGCTACGGCGGGAATACGGATATAGTGGCGCCGTTCGACGTGACGACACCGTTCGTGTTTGATCATGCGTACTACGGGAATTTGGAAGGTAAATTGGGATTATTGGCTACGGATCAAGCTCTGGTTTCGGATATGAGGATGAAGACGATGGTGCAGAATTTGGCGAAGGATAAGCAGAAGTTTTTTCAAGCTTTTGCGGCGGCGATGGAGAAAATGGGGTCGATTGGCGTGAAAAGGGGACGAAGACATGGGGAGAGAAGGATTGATTGTAGCATTCATCAGACTTGA 1068 53.46 MPAPPPTSISSSPLSLLCFLTLLLVFHHTPSKCAAAAAAKRAPARRPRLLSVDYYNKTCPHLEQLVSSITNQQFRDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKMAAEKDAEDNKGLREEGFESIKKAKALVESKCPGVVSCADILAIAARDFIHLAGGPYYQVKKGRWDGKISMASRVGSNLPRANSTVDQLLKLFNSKGLSADDLVVLSGAHTIGFAHCENFISRLYDYRGTKQPDPAIDGRLLKALKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLEGKLGLLATDQALVSDMRMKTMVQNLAKDKQKFFQAFAAAMEKMGSIGVKRGRRHGERRIDCSIHQT 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14427638 14430405 + MC03g0768 Mch3g1101 684004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1101 355 PANTHER - 44 352 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Mch3g1101 355 SUPERFAMILY Heme-dependent peroxidases 50 352 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601(InterPro)
Mch3g1101 355 Pfam Peroxidase 69 317 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 Gene3D - 53 352 - -
Mch3g1101 355 Gene3D Peroxidase, domain 2 190 332 - -
Mch3g1101 355 FunFam Peroxidase 190 332 - -
Mch3g1101 355 FunFam Peroxidase 53 199 - -
Mch3g1101 355 ProSiteProfiles Plant heme peroxidase family profile. 49 354 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 CDD secretory_peroxidase 50 351 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Plant peroxidase signature 327 340 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1101 355 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1101 Mch-Chr3:14427638 Mch3g1471 Mch-Chr3:16947625 1.87E-88 dispersed
Mch3g1101 Mch-Chr3:14427638 Mch4g0127 Mch-Chr4:841842 5.85E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1101 K00430 - csv:101216263 602.438