Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1125 ATGGAAGATGCTAATTCTTGGTTAAGGAGGACCAAATTTTCTCACACAGTATACTACCGTTTAGACTCCTTAAGATTGGCCTCCATTCCTCTCACCATTCAGCCACCAATCAATTCAGTCGGGCAAACAAAAGTTGTCACAGCTCCTTCTCATCATAGATCTACCCTTCGTTATAACGAGAGCAACAATTTTCTTAACAAGCAGAGGTCTCTGTCTCCGTCTCCACAGACTACACTCTCCGGCGCACTTAAGGATGCACGAACCGATCAGAAGCGATTTGCAACTCCACAGCCTCAGAGGAGAGAATCCATAAAAGAGAAGGGTAAAAGGGTATTCTGTAAAGAAGCTAAGGTGCACAGTTCCTTAAAGGAAGAGAAGTTAAAGAGCCCGCTGAAGCAGCTTGCTTCATTGAAAGGCAGTCCGAAATCCAAATTCATGAAGGAGTCTTCTTGGACCAAGTGTTTTGAGCACAGTGGAGGGAGGGTCACTGCTGTTGAAGCTGTAGATGAATTGTCTGTTGACTTGTCCAAGCTCTTTCTTGGGAATAGATTTGCTTATGGAGCTCATAGTCGGCTTTACCATGGAATTTACTATGATAAAGTTGTTGCTGTCAAGATAATAAATCTACCGGACGACGACGAAAATGGAGATCTTACAGCTCGCTTAACGAAGCAGTTCGGCAGGGAAGTAACCCTTTTATCTCGTCTCCACCATCCCAACGTTATTAAGTTGGTAGCAGCTTGCAGAAAGCCACCCGTTTATTGCATCATCACTGAGTATCTCTCACAGGGTTCCTTAAGGGCATATCTACACAAACTTGAAAACAAATCTCTGCCTCTGAAAAAACTGCTTGCAATCGCCTTGGACATTGCTCGTGGGATGGAATACATACACTCACAAGGCGTTATTCATCGCGACCTTAAACCGGAGAACGTTCTTATCGATCAAGACTTTTGCCTAAAGATTGCGGATTTCGGTATTGCTTGTGAGGAGGCACATTGTGATACACTGGCCAATGACCCCGGAACTTATCGTTGGATGGCCCCAGAGATGATCAAACGTAAACCTTATGGACGAAAGGTTGATCTCTACAGCTTTGGGCTTATCTTGTGGGAACTTGTGGCTGGAACAGTCCCTTATGAGGACATGACTCCCATCCAAGCCGCTTATGCAGTTGTAAATAAGAACATTAGACCAGCTATCCCGAGGGAGTGTCCACCGGTGCTGCGGGCGTTGATCGAGCAATGCTGGTCGGAGCAATCGGAAAAGAGGCCGGAGTTTTGGCAGGTGGTGAAGGTACTAGAGCAACTTGAGAGTTCAGTTGGGGGAGGAGATGGTACATTGATGAGTGTTGAGCAGCAGCCAAGTTGGGAAGATCACAAGAAAGGGCTAAAGCATTGGATGCAAAAGCTAGGGCCTCAGCATTCTCAGACTTCTTCTCACATCTCCAAATCATCTAAATTCATATGA 1470 45.58 MEDANSWLRRTKFSHTVYYRLDSLRLASIPLTIQPPINSVGQTKVVTAPSHHRSTLRYNESNNFLNKQRSLSPSPQTTLSGALKDARTDQKRFATPQPQRRESIKEKGKRVFCKEAKVHSSLKEEKLKSPLKQLASLKGSPKSKFMKESSWTKCFEHSGGRVTAVEAVDELSVDLSKLFLGNRFAYGAHSRLYHGIYYDKVVAVKIINLPDDDENGDLTARLTKQFGREVTLLSRLHHPNVIKLVAACRKPPVYCIITEYLSQGSLRAYLHKLENKSLPLKKLLAIALDIARGMEYIHSQGVIHRDLKPENVLIDQDFCLKIADFGIACEEAHCDTLANDPGTYRWMAPEMIKRKPYGRKVDLYSFGLILWELVAGTVPYEDMTPIQAAYAVVNKNIRPAIPRECPPVLRALIEQCWSEQSEKRPEFWQVVKVLEQLESSVGGGDGTLMSVEQQPSWEDHKKGLKHWMQKLGPQHSQTSSHISKSSKFI 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14599627 14602701 + MC03g0788 Mch3g1125 684028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1125 489 PRINTS Tyrosine kinase catalytic domain signature 361 383 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 PRINTS Tyrosine kinase catalytic domain signature 296 314 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 PRINTS Tyrosine kinase catalytic domain signature 342 352 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 PRINTS Tyrosine kinase catalytic domain signature 258 271 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 PRINTS Tyrosine kinase catalytic domain signature 405 427 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 SMART serkin_6 178 437 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 SUPERFAMILY Protein kinase-like (PK-like) 160 434 IPR011009 -
Mch3g1125 489 MobiDBLite consensus disorder prediction 62 84 - -
Mch3g1125 489 Gene3D Transferase(Phosphotransferase) domain 1 263 486 - -
Mch3g1125 489 Pfam Protein tyrosine and serine/threonine kinase 183 434 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 FunFam serine/threonine-protein kinase HT1 263 454 - -
Mch3g1125 489 MobiDBLite consensus disorder prediction 85 106 - -
Mch3g1125 489 MobiDBLite consensus disorder prediction 62 106 - -
Mch3g1125 489 CDD STKc_MAP3K-like 187 434 - -
Mch3g1125 489 Gene3D Phosphorylase Kinase; domain 1 166 262 - -
Mch3g1125 489 PANTHER SERINE-THREONINE PROTEIN KINASE 73 437 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch3g1125 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1125 489 ProSiteProfiles Protein kinase domain profile. 178 437 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1718 Mch-Chr1:17777500 Mch3g1125 Mch-Chr3:14599627 3.12E-109 dispersed
Mch3g1125 Mch-Chr3:14599627 Mch3g1453 Mch-Chr3:16850732 5.18E-109 dispersed
Mch1g1975 Mch-Chr1:19388249 Mch3g1125 Mch-Chr3:14599627 1.51E-32 wgd
Mch1g1871 Mch-Chr1:18761058 Mch3g1125 Mch-Chr3:14599627 6.08E-221 wgd
Mch2g0711 Mch-Chr2:4849705 Mch3g1125 Mch-Chr3:14599627 1.75E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77261 PF07714 PK_Tyr_Ser-Thr 4.00E-61 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1125 - - - 0.0