Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1127 CTTCTTCTCCCATTTCTTCTCTCTTTCCCCCTTCTTTTCTACTCCACATCTGCCATCGATTTCGTCTTCAACGGCTTCAATTCAACCGATGTCTCCCTCTACGGCAACGCCTCCATCGAATCTCGAATTCTCACTCTCACCAACCAAACAAGTTTCTCAGTCGGTCGCGCTCTGTACCCATCCAAAATCCCCACCAAGGACCCCAATTCTTCTCGCGTTTACCCCTTCTCCACTTCCTTCATCTTCGCCATGGCTCCCTACAAGGACATTCTGCCCGGTCATGGCCTCGTTTTCATCTTCGTCCCGGCGGCGGGAACCGAAGGAACTAGCTCTGCCCAGAATCTGGGTTTTCTCAACTTTACGCTCAATGGGAACCCCAACAACCACGTCTTTGGAATTGAGTTCGATGTGTTTGCCAATCAAGAATTCAACGACCCCAACGACAATCATGTGGGAATCGACTTTAATTCCCTGACCTCGAACTCCACCGAAGAGGCTGGGTTTTGGTCGGACGGCGATCGGAGTGGACAGGATTCGTTCAATAGACTGAAGCTTAATAGTGGCGAAAATTACCAAGTTTGGATCGACTACTCCGATTTTCTGATGAACGTCACCATGGCACCGGCAGGGATGAAAAGGCCGCGACGGCCGTTGTTTAATGTCTCTGTCAATCTCTCTGAAATTTTCATCGACAAAATGTTTGTGGGGTTCACGAGCGCCACCGGGCAGTTGGTACAGAGCCACAAGATTTTAGCCTGGAGTTTCAGTGACACCAATTTTTCGTTAAGCGAGAGTTTGATCACCACTGATTTGCCCTCCTTCGTCCTCCCAAAAGATCCAATCACCAAATCGAAATGGTTCATCGCCGGAGCGACAGTCAGCAGTTTCCTCATCTTTTGTTTTCTCGCAGCGATTTCGTCGATTTTGATCGCCGGGCACCGTAGGAGAGCCAGAGCCAGAGCGGAAATGGAGGATTGGGAATTGGAGTATTGGCCGCACCGAATCACATATCAAGAAATCGAGTCGGCGACAAAAGGGTTTGCAGAAGAAAACGTAATCGGAATCGGAGGGAGCGGGAAAGTGTACAAGGGGGTTTTGGCCGGAGCCGGAGGAGGTTCAGAAGTCGCAGTGAAGCGAATTTCCCACGAAAACGGCGGGATCCGAGAGTTCTTAGCCGAAATCTCGAGCATAGGAAGATTAAAACACAGAAATCTAGTGAGTTTAAGGGGTTGGTGCAAGAAAGAAAAAGGGAATTTCTTACTAGTGTACGATTACATGGAAAATGGAAGTTTAGACAAATGGGTATTCGATTGCGAGGAGAGAAACATGTTAAATTGCGAGGATCGAATACGAATATTGAAAAACGTAGCCTCCGGGGTTCTGTATCTACACGAAGGCTGGGAATCGAAGGTCCTCCACAGGGACATCAAAGCGAGCAACGTGTTACTGGACAAGGAGATGAACGGAAGGCTGGGAGATTTCGGGTTGGCCCGAGTCCACGCCCACGGCCAAGTGGCCAGCACCACACGAGTGGTGGGCACCATGGGGTACATAGCGCCGGAGCTGATCCGCAGCGGCCGAGCATCGGCTCAGTCGGACGTGTTCGGTTTTGGGGTTATGATTTTGGAAGTGATGTGCGGGCGGAGGCCGATAGAGGAGGGGAAGACGCCGCTGGTGGAATGGGCGCGGCGGCTGGCGGTTGAAGGGGAACTGAGGGCAGCGGTGGACGAGAGGGTGAGGAAGAAGGGGGGGTGGAGCGAGGAGGAAGTGGAGAGAGTGCTGCATTTGGGGCTGTTGTGTGCGCACCCTGACCCGGCGGCGCGCCCCACGATGAGGCAAATTGTGAAAGTTTTGGAAGGAAATTTGGAAGTGGACCAGAATGAAAGCGAGAGCGTGAATGCTTATTTGCTTCAGAGATTGAAGTCACAAGAAATGTGGTCCGATTCTTCCGTTGGTTTTGGGCATAAATTGCATCCTACTTTTGAGGATTTTCTGCAGTCTTCTTCAACTTCCCTCTCTTGGTCTACTTCTATTGTTACCGGCAGG 2046 51.03 LLLPFLLSFPLLFYSTSAIDFVFNGFNSTDVSLYGNASIESRILTLTNQTSFSVGRALYPSKIPTKDPNSSRVYPFSTSFIFAMAPYKDILPGHGLVFIFVPAAGTEGTSSAQNLGFLNFTLNGNPNNHVFGIEFDVFANQEFNDPNDNHVGIDFNSLTSNSTEEAGFWSDGDRSGQDSFNRLKLNSGENYQVWIDYSDFLMNVTMAPAGMKRPRRPLFNVSVNLSEIFIDKMFVGFTSATGQLVQSHKILAWSFSDTNFSLSESLITTDLPSFVLPKDPITKSKWFIAGATVSSFLIFCFLAAISSILIAGHRRRARARAEMEDWELEYWPHRITYQEIESATKGFAEENVIGIGGSGKVYKGVLAGAGGGSEVAVKRISHENGGIREFLAEISSIGRLKHRNLVSLRGWCKKEKGNFLLVYDYMENGSLDKWVFDCEERNMLNCEDRIRILKNVASGVLYLHEGWESKVLHRDIKASNVLLDKEMNGRLGDFGLARVHAHGQVASTTRVVGTMGYIAPELIRSGRASAQSDVFGFGVMILEVMCGRRPIEEGKTPLVEWARRLAVEGELRAAVDERVRKKGGWSEEEVERVLHLGLLCAHPDPAARPTMRQIVKVLEGNLEVDQNESESVNAYLLQRLKSQEMWSDSSVGFGHKLHPTFEDFLQSSSTSLSWSTSIVTGR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14612830 14614875 - MC03g0790 Mch3g1127 684030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1127 682 ProSiteProfiles Protein kinase domain profile. 347 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1127 682 SUPERFAMILY Protein kinase-like (PK-like) 325 619 IPR011009 -
Mch3g1127 682 ProSitePatterns Protein kinases ATP-binding region signature. 353 378 IPR017441 GO:0005524(InterPro)
Mch3g1127 682 FunFam L-type lectin-domain containing receptor kinase S.4 426 631 - -
Mch3g1127 682 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 309 425 - -
Mch3g1127 682 Pfam Protein kinase domain 348 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1127 682 CDD lectin_legume_LecRK_Arcelin_ConA 19 256 IPR001220 GO:0030246(InterPro)
Mch3g1127 682 SMART serkin_6 347 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1127 682 Pfam Legume lectin domain 19 260 IPR001220 GO:0030246(InterPro)
Mch3g1127 682 FunFam L-type lectin-domain containing receptor kinase S.4 17 263 - -
Mch3g1127 682 Gene3D - 17 265 - -
Mch3g1127 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1127 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 263 IPR013320 -
Mch3g1127 682 Gene3D Transferase(Phosphotransferase) domain 1 426 643 - -
Mch3g1127 682 PANTHER - 26 624 IPR050528 GO:0005886(PANTHER)
Mch3g1127 682 CDD STKc_IRAK 353 620 - -
Mch3g1127 682 Gene3D Phosphorylase Kinase; domain 1 309 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1127 Mch-Chr3:14612830 Mch5g1860 Mch-Chr5:18765416 4.32E-162 dispersed
Mch5g0204 Mch-Chr5:1340988 Mch3g1127 Mch-Chr3:14612830 5.32E-22 transposed
Mch7g0835 Mch-Chr7:12913063 Mch3g1127 Mch-Chr3:14612830 2.44E-116 transposed
Mch8g2133 Mch-Chr8:24443809 Mch3g1127 Mch-Chr3:14612830 1.09E-142 transposed
Mch2g0723 Mch-Chr2:4932723 Mch3g1127 Mch-Chr3:14612830 4.61E-61 wgd
Mch3g1127 Mch-Chr3:14612830 Mch4g0151 Mch-Chr4:1032141 2.69E-250 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77262 PF00069 Pkinase 5.10E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1127 - - - 0.0