Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1187 ATGGAACCCATCAGCAACACCATTCCATTTCTTCTTCTTCTTCTTTGGTTCGTTTTAAAAATTTCCGGCAGCATTGATTCGATCACATCAACAAAAATCCTCAAAGACCCTGAAACTGTACTGTCCAATCGCGGTTTCTTCGAATTGGGTTTCTTCAGCCCTCCAAATTCGACATATCGGTACTTGGGGATTTGGTGTAAACGAGTGTCTGTACCAACTGTCGTCTGGGTAGCGAACAGAGACAAACCTCTCAAGAACAAATCCGGAGTTTTCGCCGTATCCAACGACGGCAATCTCGTGGTATTAGATGATGAGCAGAACAAAATTCTTTGGAATTCCAGCGTTTCAAACGCTGCAGTGAATTCCACCGCTCGGCTTCTAGATTCCGGAAACCTTATTTTGCAAGATCCTGCTTCAGGGACCATCACATGGGAGAGTTTCAAAAACCCTTCAGACAAATTCTTGCCAATGATGAAATTCATCACAAACACAATCACGAACCAGAAAGTAGAAATCGTGTCGTGGAAAAGCCCTTCGGATCCATCTTCAGGGAATTTCTCCTTCGGAATCGACCCTTTGACCATCCCTGAAGTTGTAATTTGGAAAAACGGCCGCACATATTGGAGGTCCGGTCCGTGGGACGGACAAGTTTTCATCGGAATACCCGGTATGAACTCTGACTATCTTCATGGAGGTAATCTCGTAATCGAAAACAAAACTTACTCTCTCTCGGTTGCCAATGCAAACGAAGCTCAGTTATTCTTTTATTACCTCAACCCCAAGGGAATTCTGGAAGAGAATCAATGGGATACTGAGGAGCAGAAATGGGAGGCCGCCTGGACAGCTCCCGAAACAGAGTGTGATGTTTATGGCGCTTGTGGGGCATTTGGAGTCTGTAATTCTCAAGATACCTCAATTTGCAGTTGTTTAAAGGGTTTTAGGCCAAAGAAAGCAGAGGAATGGAACAGAGGAAATTGGACAAGTGGGTGTGCGAGGAATTTGCCATTGGAGTGTGAGAAGAACAACTCCAGTGAAGAAAATGGGAGGGAAGATGGGTTTTTGAAGGTGGAAATGGTTAAAGTTCCAGACTTTGCAGATTGGATTGTTGCTTCGGAAGATGAGTGCAGAGTCCAGTGCTTGTCAAATTGTTCTTGTTCTGCTTATACATACAAAACAGGGATTGGTTGCATGATATGGAGAGGGGACTTAATTGACATTCAAAACTTCAAAAATTTTGGAGTTGACATTTATGTTCGGGTGGCTTATTCAGATTTGGCTGATGAAAGTGGAAGCACTACCAAAGACGTGAAAGCAGTCATCATAGCTTCTGTAATATCAGGAACCTTCATCCTTATCTGCTGCATATACTGCTTTTGGAAAAGGAAAAGCCAGCTGAAGTTTTTGTTTAAGACTGGTGATATGAAGCATGACAAAATGGATCAAGTTAAGCTTCAGGAGCTGCCTCTTTTTGATTTTGAGAAGCTGGAAACTGCGACTAATCACTTTCACTTCAATAACAAGCTTGGTGAGGGAGGGTTTGGGCCAGTGTACAAGGGAAAATTGGTAGATGGACAAGAAATAGCAGTAAAGAGACTTTCGAAAACATCTGGACAAGGGCTTGAAGAGTTTACAAACGAAGTAATGGTGATCTCGAAACTACAACATAGAAATCTTGTGCAACTTCTTGGATGTTGCATGGAGGGAGAAGAAAGGATGTTGGTATATGAGTACATGCCAAATGGAAGTTTGGATTCAATTATTTTTGATTCCAAAAAAAAAAATTTAGATTGGCGAAAAAGACTAATCATTATTGAAGAGATTGTTCGAGGACTTCTGTATCTTCATAGAGATTCAAGGTTAAAAATCATTCATAGAGATCTCAAAGCTAGTAACATTTTATTAGATAGAGATTTAAATCCAAAAATTTCAGATTTTGGTACCGCTAGAATTTTTTACAGCAATGAAGCTCAAGCCAATACGACAAGGGTTGTGGGCACTTATGGCTACATGTCTCCTGAATATGTAATGAAAGGTCAATTCTCGGAGAAATCTGACGTCTTTAGCTTTGGCGTTTTATTGCTTGAGATTATCAGTGGAAGAAAAAATACAAGTTTTTATGATAACGAGCATGCTTTGAACCTTCTCGGATTCGCATGGAAATTATGGATGGAAGATAATTTGGTCGCTTTGATTGATCAAACAATGTTTGAATCGGATTACAAAATAGAGATTTCAAGGTGCATTCACGTGGGACTCTTATGTGTTCAAGAATTTACAAATGATAGACCAAATATACCGACAATTCTTTGTATGCTCCGTAATGAGATCACAGATCTTCCAACGCCAAAGCAACCTGGATTTAGTAGCAGCCAAATTGAGATGGAGATTCAGAGAGAGCCATTGGGACAAAATCATGTTGGAACTTGTTCGCCAAACATGATCACAGTTACCACATTTGAAGCGCTTCATACAAGAAAAGGAGAGATGGAAAATTTGACTCCCAGATTCAATTTTTTGTGTTTGATCTTTTTCTGGACACTCGTACCTCTGTTTCTCAGACGATCAATTGCAGGCAACAGCATAAAAGCAGGGGAACCCATTAACGATACCCAATCAATTGTTTCAGCCGCCCAGAAGTTTGAATTGGGATTCTTCTCTGTGCCCAAAGGCTCCAGTTTCAAGTATTTAGGAATATGGTACAAGAACATTCCCGAGACAGTCGTTTGGGTGGCAAACAGAGATAACCCAATTGTAAACTCCTCTGCGACTCTAAATTTCAGTGGAGATGGAAACTTAGTTCTAGTCAATCAAACAGGTGCGGCTTTTTGGTCTTCAAATTCGACGATATCAGTGAAAACCCCTGTTGCCCAGCTGCTGGATTCTGGTAATTTGGTGTTGAAAGATTCTGGGTCTGAAATTCCTTTGTGGCAGAGTTTTGATTATCCCTCTGATACTCTGTTACCGGGCATGAAACTCGGGTGGGAATCCAAAACGGGTCTGACCCGGAAGTTAACATCATGGAGAAGTCCAAACGATCCATCGTCCGGAGAATTCAGTTATAGCCTGAACACATATGGGCTTCCTCAATTTGTGGTTCGTAAAGGAAACAAGACGATGTTTAGGGGCTGGCCATGGGGCGGGCCATGGTACGGAACAAGGTTTAGTGGTAGCCCTCCTCTCAGAGAGAACCCATTTTATTTTCCAAAGTTCGAATATGAAGCTGGGGAAGTAACCTATTCGTATGATGCTGCGAACAATCTCACTCTAAGACTTGTGCTGAACGCGGATGGGACATTTGAGCAATTTTATTGGGACGATGGTGGAAAATATTGGTACCCTTTGTATATATTGCCCGGAGACCGCTGCGATGACTATGGACTCTGCGGAGATTTTGGTATTTGTACATTTTCCCTCACAGCACAATGCGATTGCATGGCTGGGTTTGAACCCAAATCGCCCCAAGATTGGGAGAAGTTAAGGTGGTCAGATGGGTGCGTTAGAAGGGACAGTCAAATCTGCGGAAATGGAGAGGGATTCAAAAGAATCAGCAGCGTGAAATTGCCGGATTCTTCTGGGTATTTGGTGAATGTTAATAAGAGCATTCAAGACTGCGAGGCGGCGTGCTTGAACAACTGCTCTTGCTTGGCCTACGGAATAATGGAAGTTCGCACAGGCGGCTATGGCTGCGTTAATTGGTTTCAGAAATTGATGGATGTTAGATTTGTTCCTGAAAATGGACAGGATCTCTATGTGAGAGTGGCGGCTTCAGAATTAGGTACTGAATGCAAATCCTTCATTCTAATTTTTGTTTTTTCTCTCAAGAAGGGCCTGTTTTCAGCCCTTGTATGTTGCTTGGCTATTGTGAATCTGTATGTGAATAAAGATGAGATTACCAATACTTCATCTGCTGTAGACTCGACCAACAAGAAGCTTATGGTTGCGATCAGGGAGTTTCAGTCTCAAGAAAACGAAGTCGAGATGCCAATCTATGATTTTACTATGATTGAGACTGCCACAAATTATTTTTCTTTTGCAAATAAGATAGGCGAAGGCGGTTTTGGTCCTGTGTACAAGGGAAAGCTTCCATGTGGACAAGAGATTGCAGTAAAAAGGCTGGCAGAAGGCTCTGGCCAAGGGCAAAGCGAGTTCAAAAACGAGGTTCTGTTGATCTCCCAACTTCAACATCGAAACCTTGTCAAACTGCTTGGTTTCTGCATTCACCAGGAAGAAACATTACTGGTCTATGAATATATGCCGAATAAAAGTTTAGACTACTTCCTCTTTGATAACAAGAGGCGATCTTTACTCGACTGGAAAAAGAGATTGGATATCATAATTGGAATTGCTCGAGGACTTCTTTATCTCCATAGAGATTCAAGGCTTAGAATAATACATAGGGATCTCAAAGTGAGTAATATATTACTAGACGATGAAATGAATCCAAAAATTTCAGACTTCGGTATGGCGCGCATGTTTGCCGAGGACGAAACTATGACAAAAACCAAAAGGGTTGTTGGGACCTATGGCTATATGTCTCCAGAATATGCACTCGATGGATATTTTTCACTGAAATCTGATGTGTTCAGCTTCGGAGTTATTCTTTTGGAAATAGTTAGTGGTAAGAAGAACAGAGGGTTCTTCCATTCCGAGCATCAACTAAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGAAAATGCTTTGGAATTGATGGATGCAGCATTGAAGGATCAATTTCAACCCTCTGAAGCAGTGCGATGCATTCAAGTAGGCCTTTTGTGTGTTCAACAGAATCCGGATGAAAGGCCAACTATGTGGTCAGTTATTTCAATGTTAGAGAGTGAAAATATGTGGTTATCTCATCCTAAACAACCCGGATTTTACATGGAAAGAATGATTTCTAAGGCCGATAGATTATCGGCTGAAAGTTCCACTTCGAATGAAGTGACGGTTACATCGCTAGGAGGTCGT 4974 41.68 MEPISNTIPFLLLLLWFVLKISGSIDSITSTKILKDPETVLSNRGFFELGFFSPPNSTYRYLGIWCKRVSVPTVVWVANRDKPLKNKSGVFAVSNDGNLVVLDDEQNKILWNSSVSNAAVNSTARLLDSGNLILQDPASGTITWESFKNPSDKFLPMMKFITNTITNQKVEIVSWKSPSDPSSGNFSFGIDPLTIPEVVIWKNGRTYWRSGPWDGQVFIGIPGMNSDYLHGGNLVIENKTYSLSVANANEAQLFFYYLNPKGILEENQWDTEEQKWEAAWTAPETECDVYGACGAFGVCNSQDTSICSCLKGFRPKKAEEWNRGNWTSGCARNLPLECEKNNSSEENGREDGFLKVEMVKVPDFADWIVASEDECRVQCLSNCSCSAYTYKTGIGCMIWRGDLIDIQNFKNFGVDIYVRVAYSDLADESGSTTKDVKAVIIASVISGTFILICCIYCFWKRKSQLKFLFKTGDMKHDKMDQVKLQELPLFDFEKLETATNHFHFNNKLGEGGFGPVYKGKLVDGQEIAVKRLSKTSGQGLEEFTNEVMVISKLQHRNLVQLLGCCMEGEERMLVYEYMPNGSLDSIIFDSKKKNLDWRKRLIIIEEIVRGLLYLHRDSRLKIIHRDLKASNILLDRDLNPKISDFGTARIFYSNEAQANTTRVVGTYGYMSPEYVMKGQFSEKSDVFSFGVLLLEIISGRKNTSFYDNEHALNLLGFAWKLWMEDNLVALIDQTMFESDYKIEISRCIHVGLLCVQEFTNDRPNIPTILCMLRNEITDLPTPKQPGFSSSQIEMEIQREPLGQNHVGTCSPNMITVTTFEALHTRKGEMENLTPRFNFLCLIFFWTLVPLFLRRSIAGNSIKAGEPINDTQSIVSAAQKFELGFFSVPKGSSFKYLGIWYKNIPETVVWVANRDNPIVNSSATLNFSGDGNLVLVNQTGAAFWSSNSTISVKTPVAQLLDSGNLVLKDSGSEIPLWQSFDYPSDTLLPGMKLGWESKTGLTRKLTSWRSPNDPSSGEFSYSLNTYGLPQFVVRKGNKTMFRGWPWGGPWYGTRFSGSPPLRENPFYFPKFEYEAGEVTYSYDAANNLTLRLVLNADGTFEQFYWDDGGKYWYPLYILPGDRCDDYGLCGDFGICTFSLTAQCDCMAGFEPKSPQDWEKLRWSDGCVRRDSQICGNGEGFKRISSVKLPDSSGYLVNVNKSIQDCEAACLNNCSCLAYGIMEVRTGGYGCVNWFQKLMDVRFVPENGQDLYVRVAASELGTECKSFILIFVFSLKKGLFSALVCCLAIVNLYVNKDEITNTSSAVDSTNKKLMVAIREFQSQENEVEMPIYDFTMIETATNYFSFANKIGEGGFGPVYKGKLPCGQEIAVKRLAEGSGQGQSEFKNEVLLISQLQHRNLVKLLGFCIHQEETLLVYEYMPNKSLDYFLFDNKRRSLLDWKKRLDIIIGIARGLLYLHRDSRLRIIHRDLKVSNILLDDEMNPKISDFGMARMFAEDETMTKTKRVVGTYGYMSPEYALDGYFSLKSDVFSFGVILLEIVSGKKNRGFFHSEHQLNLLGHAWKLWDEENALELMDAALKDQFQPSEAVRCIQVGLLCVQQNPDERPTMWSVISMLESENMWLSHPKQPGFYMERMISKADRLSAESSTSNEVTVTSLGGR 1658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15081308 15106613 + MC03g0839 Mch3g1187 684090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1187 1658 ProSiteProfiles Protein kinase domain profile. 1342 1620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 SUPERFAMILY Protein kinase-like (PK-like) 487 792 IPR011009 -
Mch3g1187 1658 CDD B_lectin 865 982 IPR001480 -
Mch3g1187 1658 ProSiteProfiles PAN/Apple domain profile. 1173 1254 IPR003609 -
Mch3g1187 1658 CDD STKc_IRAK 1348 1614 - -
Mch3g1187 1658 ProSiteProfiles Bulb-type lectin domain profile. 858 979 IPR001480 -
Mch3g1187 1658 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Mch3g1187 1658 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 Gene3D Phosphorylase Kinase; domain 1 1299 1417 - -
Mch3g1187 1658 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Mch3g1187 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1306 1417 - -
Mch3g1187 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 SUPERFAMILY Protein kinase-like (PK-like) 1323 1614 IPR011009 -
Mch3g1187 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 147 - -
Mch3g1187 1658 Gene3D - 854 979 IPR036426 -
Mch3g1187 1658 Gene3D - 21 147 IPR036426 -
Mch3g1187 1658 SMART ntp_6 348 420 IPR003609 -
Mch3g1187 1658 SMART ntp_6 1174 1253 IPR003609 -
Mch3g1187 1658 Pfam Protein tyrosine and serine/threonine kinase 1344 1612 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 Pfam Protein tyrosine and serine/threonine kinase 503 722 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 SMART serkin_6 1342 1620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 SMART serkin_6 502 753 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 CDD PAN_AP_plant 335 421 - -
Mch3g1187 1658 SMART blect_4 31 150 IPR001480 -
Mch3g1187 1658 SMART blect_4 864 982 IPR001480 -
Mch3g1187 1658 CDD PAN_AP_plant 1174 1254 - -
Mch3g1187 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 780 - -
Mch3g1187 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 577 - -
Mch3g1187 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 854 979 - -
Mch3g1187 1658 CDD STKc_IRAK 508 772 - -
Mch3g1187 1658 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 215 IPR036426 -
Mch3g1187 1658 ProSiteProfiles EGF-like domain profile. 1118 1154 IPR000742 -
Mch3g1187 1658 Gene3D Transferase(Phosphotransferase) domain 1 1418 1624 - -
Mch3g1187 1658 Gene3D Transferase(Phosphotransferase) domain 1 578 781 - -
Mch3g1187 1658 Pfam PAN-like domain 349 406 IPR003609 -
Mch3g1187 1658 Pfam PAN-like domain 1173 1239 IPR003609 -
Mch3g1187 1658 CDD B_lectin 31 150 IPR001480 -
Mch3g1187 1658 SUPERFAMILY alpha-D-mannose-specific plant lectins 907 1013 IPR036426 -
Mch3g1187 1658 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Mch3g1187 1658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1418 1621 - -
Mch3g1187 1658 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 846 1628 - -
Mch3g1187 1658 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544(InterPro)
Mch3g1187 1658 Pfam S-locus glycoprotein domain 1047 1152 IPR000858 GO:0048544(InterPro)
Mch3g1187 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1463 1475 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1187 1658 Pfam D-mannose binding lectin 906 1008 IPR001480 -
Mch3g1187 1658 Pfam D-mannose binding lectin 73 176 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1139 Mch-Chr10:8548939 Mch3g1187 Mch-Chr3:15081308 7.19E-231 dispersed
Mch11g1127 Mch-Chr11:7892222 Mch3g1187 Mch-Chr3:15081308 0 dispersed
Mch1g1806 Mch-Chr1:18260398 Mch3g1187 Mch-Chr3:15081308 5.88E-208 dispersed
Mch2g0602 Mch-Chr2:4134040 Mch3g1187 Mch-Chr3:15081308 4.24E-115 dispersed
Mch3g1185 Mch-Chr3:15069370 Mch3g1187 Mch-Chr3:15081308 1.69E-98 dispersed
Mch3g1187 Mch-Chr3:15081308 Mch3g1208 Mch-Chr3:15262262 9.60E-204 dispersed
Mch5g1653 Mch-Chr5:17363824 Mch3g1187 Mch-Chr3:15081308 7.71E-19 dispersed
Mch9g2261 Mch-Chr9:22937256 Mch3g1187 Mch-Chr3:15081308 8.70E-75 dispersed
Mch3g1186 Mch-Chr3:15073426 Mch3g1187 Mch-Chr3:15081308 0 tandem
Mch3g1187 Mch-Chr3:15081308 Mch3g1188 Mch-Chr3:15110914 9.12E-220 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77268 PF07714 PK_Tyr_Ser-Thr 1.30E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1187 - - - 0.0