Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1240 CTTGTTATGAACTTTTACAAGGACACGTGTCCCCAAGCTGAAGATATCATCAAAGAACAAGTCAGGCTTCTCTACAAGCGCCACAAGAACACTGCATTCTCCTGGCTCAGGAACATCTTCCATGACTGCGCTGTTCAATCCTGTGATGCATCTCTGCTGCTGGATTCGACAAGAAGGACCCTGTCCGAGAAGGAAACTGACAGGAGCTTCGGACTCAGGAACTTTAGGTACATTGAGACCATAAAAGAAGCAGTGGAGAGGGAGTGCCCTGGAGTTGTGTCCTGTGCGGACATCCTCGTCTTGTCCGCCAGAGATGGCATTGTTTCTCTTGGAGGACCTTACATCCCACTTAAGACAGGCAGAAGAGATGGGAGGAGAAGCAGAGCTGATGTGGTGGAAGAGTACCTTCCAGACCACAACGAGAGCATGTCTGTTGTTCTTGAAAGATTTGCAGGCATGGGTATCGACACCCCTGGAGTGGTCGCTTTACTAGGAGCTCATAGTGTTGGTAGAACACACTGTGTGAAGCTGGTTCACCGGCTGTACCCAAAGGTAGACCCTGTGCTGAACCCTGGCCATGTAGAGCACATGCTGTACAAGTGTCCTGATGAGATCCCAGATCCCAAGGCTGTGCAGTACGTGAGGAACGACCGTGGCACACCCATGATTCTGGACAACAACTACTACAGGAACATACTTGACAACAAGGGGTTGCTGATAGTGGACCACCAACTGGCCACAGACAAGAGAACAAAGCCATACGTGAAGAAAATGGCCAAGAAGCAAGACTACTTCTTCAAGGAATTCTCTAGAGCCATCGCCATCCTCTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGC 879 50.06 LVMNFYKDTCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADVVEEYLPDHNESMSVVLERFAGMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPKVDPVLNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAIAILSENNPLTGTKGEIRKQC 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15491562 15492894 - MC03g0883 Mch3g1240 684143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1240 293 FunFam Peroxidase 137 276 - -
Mch3g1240 293 PANTHER PEROXIDASE 25-RELATED 3 293 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Mch3g1240 293 Gene3D - 4 293 - -
Mch3g1240 293 PRINTS Plant peroxidase signature 92 102 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 73 86 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 215 230 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 111 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 231 248 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 271 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 10 29 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 158 170 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Plant peroxidase signature 34 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 SUPERFAMILY Heme-dependent peroxidases 2 293 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 CDD secretory_peroxidase 1 293 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch3g1240 293 ProSiteProfiles Plant heme peroxidase family profile. 1 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 Gene3D Peroxidase, domain 2 138 277 - -
Mch3g1240 293 Pfam Peroxidase 18 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Haem peroxidase superfamily signature 111 123 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Haem peroxidase superfamily signature 159 174 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Haem peroxidase superfamily signature 93 110 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1240 293 FunFam Peroxidase 4 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0791 Mch-Chr1:11556434 Mch3g1240 Mch-Chr3:15491562 1.50E-125 dispersed
Mch3g1240 Mch-Chr3:15491562 Mch6g2145 Mch-Chr6:23836053 5.26E-61 dispersed
Mch3g1240 Mch-Chr3:15491562 Mch5g1761 Mch-Chr5:18184085 9.98E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1240 K00430 - csv:101214168 582.022