Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1291 ATGAATTCTCGAGTGGAAATCGATGAGGACTCTGAAACGAAGGGAAGTATGTGGGTTCTAGACCAGAAGCTCGATCAGCCTATGGATGAAGAAGCTGGGAGACTTAGCAATATGTACAAAGAAAAGAAATTCTCCGGATTGTTGCTTCTTCGACTTGCATACCAAAGCCTTGGAGTGGTCTATGGAGATTTGGGGACTTCTCCCCTGTATGTTTTTTACAATACATTTCCTCGTGGAATTTCTGATCCGGAGGATGTAGTTGGAGCACTTTCATTGATTATATACTCTCTCACTCTCATTCCACTCATAAAGTATGTGTTTATCGTGTGTAAAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTATGTCGTCATGCAAAAGTAAAAACTATTCCAAACCAACATCGAACTGACGAGGAGTTAACAACATATAGCCGCTCTAAATTTCATGAGCAATCGTTTGCTGCTAAAACTAAAGGATGGCTTGAGAGACAAGCATCCAGGAAGAATGCGTTGCTTATTCTTGTCCTTGTTGGCACTTCCATGGTAGTTGGAGATGGAATTCTCACTCCTGCAATATCGGTTTTATCGGCTGCGGGAGGTATCAAAGTAAACCACCCCCGTGTGAGCAATGATGTAGTTGTGCTTGTTGCTGTTGTAATACTAGTAGGACTATTCAGCTTGCAACGCTATGGTACTGATAGAGTTAGTTGGCTGTTTGCTCCAGTTGTGCTACTTTGGTTCCTATTAATTGGAGGTATAGGCTTGTTCAACATCTGGAAATATGATAAAAGCATTCTAAGAGCCTTTTCACCTGTGTATATTTATCGCTATTTTAGAAGGCGGGGGATGGATGGTTGGACGTCCCTCGGAGGTGTTCTGCTGAGTATAACAGGCACAGAGGCTCTGTTTGCCGATCTGGCTCATTTTCGTGTAGCAGCTATTCAGATTGCTTTTACAGTAGTTGTTTTTCCTTGCCTTCTCTTGGCATATTCTGGACAAGCTGCCTACCTTATGAACAATAAAGACCATGTGGTTGACGCCTTCTATCGTTCAATCCCAGAGTCCATATATTGGCCAGTGTTCTTTGTTGCAACTGCTGCTGCTATAGTTGCTAGTCAGGCAACTATATCTGCAACATTTTCAATAATCAAGCAGGCTCTTGCTCATGGCTGCTTTCCCAGAGTTAAAGTTGTCCATACGTCAAAGAACTTTCTCGGCCAGATATACGTTCCTGATATTAACTGGATCCTCATGCTTCTTTGCATTTCTGTGACAGCAGGATTTAAGAATCAAAGCCAAATTGGAAACGCATATGGGACAGCAGTGGTGGTAGTCATGCTTGTGACCACATTGCTTATGATTCTAATCATGATCTTGGTGTGGCGCTGTCATTGGGTCATCGCCATGATTTTCACCGGATTGTCGCTAATCGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTCCCCCTTGTGATTGCTGCAGCCTTTCTCATCATCATGTATGTGTGGCATTACGGTACTGTTAAACGATATGAATTCGAGCTGCACAGTAAAGTTTCAATGGCATGGATTCTCGGGCTTGGTCCCAGTCTTGGACTAGTCCGCGTTCCTGGAATTGGACTCGTGTACACCGAGCTAGCAAGCGGCGTACCTCACATATTTTCCCACTTCATTACAAATCTGCCTGCCATTCATTCTGTTGTTGTGTTTGTCTGTGTGAAATACCTTCCAGTCTACACAGTGCCAGAGGAAGAAAGGTTCCTGGTAAAGCGGATCGGACCCAAGAATTTCCACATGTTCCGTTGCGTCGCGAGATACGGTTATAAAGACCTCCACAAAAAGGACGATGATTTTGAGAAAAAGCTTTTTGATAGCATCTTCCTCTTTGTGAGGCTTGAATCCATGATGGAAGGATGTTCAGACTCTGATGAGTACAGTTTGTATGGTCAGCAAACTGAGCATTCAAGGGATGGCCTGTTGATTGGCAACCATGGAAATGGAAATGCAGCTTCATCCAATGTGGACACAACGTTCTCATCAGTTGACTCGATCGTGCCCGTTAGATCTCCCGTGCGTTCAAATAACACGGTAAGATCATCTGGGCAGGCAAGCAACCACACCGATAGCGACGAGATAGAATTCTTGATTAGGTGTAGAGATGCTGGGGTGGTGCACATACTGGGGAACACTGTAATTAGAGCAAGAAGGGAATCAAAATTTTACAAGAAGATAGCTGTTGATTACGTTTATGCCTTTCTTAGGAAGATTTGCAGGGAGAACAGTGTGATTTTCAATGTTCCTCATGAGAGTCTATTAAATGTTGGCCAAATTTTCTATGTATAG 2385 43.52 MNSRVEIDEDSETKGSMWVLDQKLDQPMDEEAGRLSNMYKEKKFSGLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPRGISDPEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHAKVKTIPNQHRTDEELTTYSRSKFHEQSFAAKTKGWLERQASRKNALLILVLVGTSMVVGDGILTPAISVLSAAGGIKVNHPRVSNDVVVLVAVVILVGLFSLQRYGTDRVSWLFAPVVLLWFLLIGGIGLFNIWKYDKSILRAFSPVYIYRYFRRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVVVFPCLLLAYSGQAAYLMNNKDHVVDAFYRSIPESIYWPVFFVATAAAIVASQATISATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYVPDINWILMLLCISVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWVIAMIFTGLSLIVECSYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFELHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGNHGNGNAASSNVDTTFSSVDSIVPVRSPVRSNNTVRSSGQASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYVYAFLRKICRENSVIFNVPHESLLNVGQIFYV 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15840278 15848304 + MC03g0912 Mch3g1291 684194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1291 794 Pfam K+ potassium transporter integral membrane domain 52 538 IPR053951 -
Mch3g1291 794 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 46 793 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch3g1291 794 NCBIfam potassium uptake protein 52 793 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch3g1291 794 Pfam K+ potassium transporter C-terminal domain 551 791 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1291 Mch-Chr3:15840278 Mch8g1338 Mch-Chr8:9828015 2.03E-262 dispersed
Mch3g1291 Mch-Chr3:15840278 Mch3g1292 Mch-Chr3:15849077 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1291 K03549 - csv:101217915 1439.86