Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1292 ATGGCGTCAAGATTCACGCCTGGTGAGGATACTGATGATAAAGATAGTATCTGGGTTTTGGATCAGGAACTCGACCAGCCAATGGATGAGGAGGCTAAGCGGCTAAAAAATACGTTTCAGGAAAAGGATCAATCTATATTTTTAATCCTACAACTTGCATTCCAAAGCCTTGGAATAGTCTACGGAGATTTAGGTACTTCCCCTTTGTATGTCTTCTACAACACATTCCCTGACGGAGTTGAAGATACAGAGGACTTGATAGGGGCATTGTCATTGATTATATACTCTCTAACCCTCATTCCCCTTATAAAGTATGTATTCATTGTCTGCAAGGCAAATGACAATGGTCAAGGTGGAACATTTGCTTTATATTCATTACTATGCCGTCATGCAAAAATATTAACTATTCCTAACCATGATCATACTGATGAGAAGCTTACAACTTATAGTCGTTCTACGTACCGCGAACAATCATTTGCTGCAAAGACTAAGAGATGGCTAGAAGGACATCATTTTAAGAAAAACATGCTTATTGTTCTCGTTCTTGTTGGCTCTTGTATGGTGATTGGGGATGGAATTTTAACACCTGCTATCTCAGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCGTGCAAAGATAAGTAACGATGTAGCTGTTCTTGTTGCTATTGCCATACTTATTGTCTTGTTTAGCATGCAACGTTATGGTTCGGATAAAGTTGGTTGGCTTTTTGCCCCAGTAGTTTTTGTGTGGTTCATCTTAATAGGAGGCATCGGAATATTTAACATCTGGAAATATGATAACAGTGTCCTCAGAGCTTTCTCTCCTGTATATATATATTGGTATTTCAAAAGGGGAGGGAAAGCTGGATGGACATCCCTTGGAGGGATCATGCTTAGCATAACAGGAACGGAAGCACTTTTTGCAGACCTATCCCATTTTCCTGTTTCCTCCATACAAATTGCTTTCACAGTAGTTGTATTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCCTATCTTATGAAAAACCCAGATTACGTTGTCGGTGCCTTCTATCATTCAATTCCAGACAATATATATTGGCCAGTATTTGTTGTTGCAACTGCCGCGGCTGTTGTTGCAAGCCAAGCCACCATATCTGCAACCTTTTCATTAGTCAAGCAAGCGCTTGCACTCGGTTGCTTTCCAAGAGTTAAAGTTGTTCATACTTCTAAGAAGTTCCGCAATCAGATATACATTCCTGATATTAATTGGATCCTGATGGTCCTTTGCATTGCCGTGACAGCTGGATTCAAAAATCAAAGCCAAATTGGAAACGCTTCTGGGACAGCAGTGATAATAGTGATGTTGGTGACCACATTTCTCATGACTTTGATAATGATATTAGTGTGGCGCTGCCACTGGACTCTAGTCCTGCTCTTCACTTGCTTATCACTGATAGTGGAGGGTACCTACTTCTCCTCAGTTGTCCAGAAGGTTTATCAAGGTGGATGGGTTCCATTGGTCATAGCAGCAGCATTTTTCATCATCATGTACGTTTGGCATTATGGTACAGCTAAACGTTATGAGATTGAGATGCACAGTAAGGTTTCAATGGCATGGATTCTTGGCCTTGGCCCAAGTTTAGGGCTTGTAAGGGTGCCTGGGATAGGGCTTGTGTACACAGAACTAGCAAGTGGAGTCCCCCATATCTTTTCTCACTTCATCACAAACTTGCCTGCCATTCATTCTGTTGTGGTTTTTGTCTGCTTGAAGTGTCTGCCTGTCTGCACAGTCCCGGAAGAGGAGAGATTTCTGGTAAAGCGTATTGGACCGAGGAATTTCCGCATGTTTCGCTGTGTAGCTAGATATGGTTACAAAGACCTCCACAAGAGAGATGATGATTTTGAGAAGAAACTATTTGATAGCCTCTTCTTGTTTGTTCGACTCGAGTCCCTACTGGATGCTGGGTCTTCGGAATCGGATGTGTCTAGCTTACTCGATCAGCAAACTGAAGCAACTATAGATTTCCAGCCGGAAAAGCCTAATTCAAATAGATCCTCCGTGGAATTGACAGACCTTCCAACGGCAGACTCGATCCAGCTTGCCAATTCTCCATTGCAGCAGAACCATACCATCATATCACCCAGTCAAGAAAACATTCAGACTGAGACGGATGAGTTAGAATTCTTGGTTAGCTGTAAAAACGTTGGAGTTGTACACATTCTTGGAAATACAGTAATGAGAGCTAGGAGGGACTCCAGTTTCTACAAAAAGGTAGCCATTGATTATATATATGCATTTCTTAGGAAGATCTGCAGGGAGAACAGCGTAATGTTCAATGTTCCCCATGAGAGTTTGCTTAATGTTGGGCAAACATTCTATATATAA 2379 41.87 MASRFTPGEDTDDKDSIWVLDQELDQPMDEEAKRLKNTFQEKDQSIFLILQLAFQSLGIVYGDLGTSPLYVFYNTFPDGVEDTEDLIGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHAKILTIPNHDHTDEKLTTYSRSTYREQSFAAKTKRWLEGHHFKKNMLIVLVLVGSCMVIGDGILTPAISVLSAVGGINVGRAKISNDVAVLVAIAILIVLFSMQRYGSDKVGWLFAPVVFVWFILIGGIGIFNIWKYDNSVLRAFSPVYIYWYFKRGGKAGWTSLGGIMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYSGQAAYLMKNPDYVVGAFYHSIPDNIYWPVFVVATAAAVVASQATISATFSLVKQALALGCFPRVKVVHTSKKFRNQIYIPDINWILMVLCIAVTAGFKNQSQIGNASGTAVIIVMLVTTFLMTLIMILVWRCHWTLVLLFTCLSLIVEGTYFSSVVQKVYQGGWVPLVIAAAFFIIMYVWHYGTAKRYEIEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCLKCLPVCTVPEEERFLVKRIGPRNFRMFRCVARYGYKDLHKRDDDFEKKLFDSLFLFVRLESLLDAGSSESDVSSLLDQQTEATIDFQPEKPNSNRSSVELTDLPTADSIQLANSPLQQNHTIISPSQENIQTETDELEFLVSCKNVGVVHILGNTVMRARRDSSFYKKVAIDYIYAFLRKICRENSVMFNVPHESLLNVGQTFYI 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15849077 15855408 + MC03g0913 Mch3g1292 684195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1292 792 NCBIfam potassium uptake protein 52 792 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch3g1292 792 Pfam K+ potassium transporter C-terminal domain 551 792 IPR053952 -
Mch3g1292 792 Pfam K+ potassium transporter integral membrane domain 52 538 IPR053951 -
Mch3g1292 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 791 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1292 Mch-Chr3:15849077 Mch8g1338 Mch-Chr8:9828015 6.50E-258 dispersed
Mch3g1291 Mch-Chr3:15840278 Mch3g1292 Mch-Chr3:15849077 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1292 K03549 - csv:101217671 1296.18