Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1301 TTTACTAAAGAAGAGCTAAGGTCGATTACGAAAAACTTCAGTGAGGGAAACCGTCTTCTTGGAGACCCAAAAACAGGTGGTACATACAGTGGGCTTTTACCTGATGGTTCAAGAGTTGCAATTAAAAGGTTAAAGAAGTCCAGCTTTCAAAGGAAAAAAGAGTTCCATTCTGAAATTGGAAGAGTTGCTAAACTTCGCCATCCAAATTTGGTTGCCCTGAAAGGATGCTGCTATGACCATGGTGACCGCTACATTGTTTATGAATTCATTGTTAATGGGCCCTTAGATAGATGGCTTCACCATGTACCAAGGGGTGGTCGAAGCTTAGACTGGACCATGAGAATGAAAATTGCCACGACTCTTGCCCAAGGGATCGCGTTCCTTCATGACAAGGTTAAGCCACATGTGGTACATCGTGATATCCGTGCCAGTAATGTACTTCTTGACGAAGAACTTGGAGCACATCTGATGGGAGTTGGCCTGTCGAAGTTG 492 43.9 FTKEELRSITKNFSEGNRLLGDPKTGGTYSGLLPDGSRVAIKRLKKSSFQRKKEFHSEIGRVAKLRHPNLVALKGCCYDHGDRYIVYEFIVNGPLDRWLHHVPRGGRSLDWTMRMKIATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEELGAHLMGVGLSKL 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15904525 15905182 - MC03g0920 Mch3g1301 684204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1301 164 SMART tyrkin_6 17 164 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Mch3g1301 164 ProSiteProfiles Protein kinase domain profile. 14 164 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1301 164 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Mch3g1301 164 SUPERFAMILY Protein kinase-like (PK-like) 3 163 IPR011009 -
Mch3g1301 164 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 164 IPR051824 -
Mch3g1301 164 Gene3D Transferase(Phosphotransferase) domain 1 90 164 - -
Mch3g1301 164 Pfam Protein tyrosine and serine/threonine kinase 20 163 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1301 164 ProSitePatterns Tyrosine protein kinases specific active-site signature. 136 148 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1301 164 FunFam C-type lectin receptor-like tyrosine-protein kinase 1 89 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1301 Mch-Chr3:15904525 Mch8g2748 Mch-Chr8:30661916 8.36E-40 dispersed
Mch3g1301 Mch-Chr3:15904525 Mch10g1082 Mch-Chr10:7953754 2.75E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77275 PF07714 PK_Tyr_Ser-Thr 7.10E-24 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1301 - - - 0.0