Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1308 CTTTTCCTCATTCTCATTCTCACCTCCGCCGTGGCGGCCTACGAAGATTTCGAGGACGACGGCGAAGAATATTCGAGCCTAGAGGTTCCGCAGTTGCAGGAGTTCTCACCTTTCGATGATTTTCTTTCGTATGGTTTCTACCAGAAAAGATGTCCCGACGTCGACGCCATCATTCACCGGAAACTCAAACAGTGGTTTGATCAAGATAACACCATCGCCGCCAGCCTCATGAGGCTCCACTTCCACGACTGCGTCGTTAGGGGTTGCGACGGCTCCATTCTTCTTGATTACGAGGGAAGCGAGAGGAGGGCTCCGGCGAGCAAGACGCTGAGGGGATTCGAAGTAATCGACGATATCAAAGCGGAGTTAGAAAAAAAGTGCCCTAAAACAGTTTCTTGCGCCGATATTCTGACCGCCGCCGCCAGAGAGGCCACCGTGCTGGTGGGCGGCCCATATTGGATGGTCCCTTATGGAAGAAGAGACGGAGTCGATTCCATTGCCGAAGAAACCAAATTAGTTCCCATCGGAATCGAAGACATCACTTCTCTCATTCAACAGTACCAATCCCTCGGCTTGAATCTCGTAGATTTGGTCGTTCTTTCAGGGGCACACACCATCGGAAGGGCAACATGCGGCGCGATACAGAGCAGGCTTTACAATTACAGCGCGACGGGGAAGGCGGACCCATCGCTGAGCCCAAAATACTTGAATTTCTTGAGAAGAAAGTGTCGATGGGCGTCGGATTACGTGGATCTTGACGCCACAACGCCTAAGAAATTCGACAGCGCCTACTACTCTAATCTCCCTAAGAAAATGGGGCTTTTGTCGACCGATTCGGCTCTGTACACCGATCCAAGGACTGCTCCCATCGTCAAAGCGTTGGCCTACCAACCCGACATCTTCCGCCATCAGTTTGCTGTGTCCATGGCCAAGCTTGGAAATGTTCAGGTTCTTACCGATCTTTTCGAAGGCGAGATTCGAACCAATTGCAGCTGTAGAAAT 1002 51.4 LFLILILTSAVAAYEDFEDDGEEYSSLEVPQLQEFSPFDDFLSYGFYQKRCPDVDAIIHRKLKQWFDQDNTIAASLMRLHFHDCVVRGCDGSILLDYEGSERRAPASKTLRGFEVIDDIKAELEKKCPKTVSCADILTAAAREATVLVGGPYWMVPYGRRDGVDSIAEETKLVPIGIEDITSLIQQYQSLGLNLVDLVVLSGAHTIGRATCGAIQSRLYNYSATGKADPSLSPKYLNFLRRKCRWASDYVDLDATTPKKFDSAYYSNLPKKMGLLSTDSALYTDPRTAPIVKALAYQPDIFRHQFAVSMAKLGNVQVLTDLFEGEIRTNCSCRN 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15935545 15937568 - MC03g0927 Mch3g1308 684211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1308 334 ProSiteProfiles Plant heme peroxidase family profile. 41 334 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 FunFam Peroxidase 174 312 - -
Mch3g1308 334 PANTHER PEROXIDASE 25-RELATED 43 330 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Mch3g1308 334 Gene3D Peroxidase, domain 2 174 312 - -
Mch3g1308 334 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 Pfam Peroxidase 60 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 FunFam Peroxidase 45 190 - -
Mch3g1308 334 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601(InterPro)
Mch3g1308 334 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 SUPERFAMILY Heme-dependent peroxidases 42 334 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g1308 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Mch3g1308 334 Gene3D - 45 334 - -
Mch3g1308 334 CDD secretory_peroxidase 42 331 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1308 Mch-Chr3:15935545 Mch9g0620 Mch-Chr9:4637878 1.30E-81 dispersed
Mch3g1308 Mch-Chr3:15935545 Mch2g0767 Mch-Chr2:5292842 1.84E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1308 K00430 - csv:101208042 596.66