Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1363 GCCGCCCATTTTGTGGATCCTCGGAGCGGTTTCTGTCCTCAGACCAAGATTTTTCACAGTCTCCGACCACCGCTCTCGCTCCCGCCGATACCTCAGCCTCTCTCCATTACTGACCATGCCCTTTCTCTCGTACAATCTTCCCCTCCTCCGGCGAACACTACCGCTCTCGTCGACTTCGACTCCGGCGTCCATGTCTCCTACGCTCTTCTCCTCCGTGAAATCCGAAATCTCTCCGCTAATCTCAAAGCTCTCACATCACTGTCCAGTGGTCAAGTGGCTTTTATTCTTGCACCGACTTCTCTGCAAGTTCCTGTGTTGTATTTCGCTCTGTTATCCATCGGCGTCACTATCTCTCCGGCTAATCCAACTGGTTCCGAGTCGGAGATTGCTCACCAGGTTCAACTCAGTAAACCGGTCATTGCATTCGCTACGTCCTCAACGGCGGCCAAGCTCCCAAGGAAGCTTGGGAAAATCCTGATAGATTCGCCTGAGTTTCTCTCCATGATGACTGAAAGCAATCGCTCGGATGGTGTCGCCGACGTTAAAATCAACCAAACCGACTCGGCGGCGATTCTCTACTCGTCAGGCACTACAGGGCGAGTGAAGGGCGTCTTTCTGTCTCATCGGAACCTCATTGCGGCCAACTCTACTCTTGCGTCGTTGGTCGAGCAAGGAGAGATAGAGCCACGTACGGTTTCTCTGTTTCTGTTACCACTGTTCCATGTTTTCGGGTTCTACATGATGATTCGAGGGATTTCTCGAGGCGATACATTGGTTCTGATGCAGAGATTCGACTTCGAGGGGATGTTAAGAGCAGTGGAGAAGTATATGGTCACGTATATTCCGGTTTCTCCGCCGCTGGTGCTGGCGTTGGCCAAGTCGGAGCAGGTGGCGAAGTACGACCTCAGTTCTCTTCAATTTTTGGGATGCGGCGGCGCTCCCCTTGGGAAAGAAGTCGTCGAGAAATTCCAAGAGAAGTTCCCCAACGTAGAAATTATACAGGGATATGGCCTGACAGAGAGTACAGCAGCGGCAGCAAGGACTTTGGGGCCTGAGGAATGCAGTAATACAAGTTCAGTAGGTCGCCTATCTGAAAGTATGGAAGCCAAGATAGTGGATCCTGCATCTGGAGAGGCCTTACCTCCTGGCCACAGAGGAGAGCTTTGGCTGCGAGGTCCTGGAATCATGAAAGGTTATGTTGAAGATGACAAGGCAACTGCTGAAACCTTGCATCCGGAGGGATGGCTAAAGACTGGTGATCTTTGCTATTTTGATTCTGACGGATTCCTCTACATTGTTGATAGATTAAAAGAATTGATCAAGTACAAGGCTTATCAGGTTCCACCTGCTGAATTGGAACTCTTGCTTCAATCCAATCCTGAGATCATTGATGCCGCTGTGATACCCTATCCTGATGAAGAAGCAGGAGAGATTCCTATGGCTTATGTGGTTAGAAAGCCTGGTAGCAATATCAGTGAGGACCAAGTCATTGATTTCATTGCAAAACAGGCATATTCAAACTCGACCAATTTCATCTTGCAGGTTGCACCGTACAAGAAAATTCGGCGAGTATCTTTTATCAACGCAATCCCGAAATCACCTGCAGGGAAGATTCTCAGGAGGGAGCTCGTCAGTCATGCTCTCTCTCAGGGTTCTAACAAGCTGCTGCCCTGCGTCGGTATCTGGTTTGCTCGGCCAAGCTCCACTTCCATGGCGGACCGAAATCCAAACTTCAACGCCGCCCATTTTGTTGATCCCCGGAGCGGTTTCTGTTCTCAAACCAAGATTTTCCACAGCCTCCGACCACCACTCTCACTTCCACCAACTTCTCAGCCTCTCTCCATTACAGAACACGCTCTCTCTCTCCTCCAATCATCCCCTCCGCCCGCAAACGCCTCCGCTCTCGTCGACTCCAGCTCCGGCGTCCATGTCCCCTACGCTCTTTTCCTCCGTCAAATCCAAAACCTGGCCTCTAATCTCAGAGCTCTTACCTCCCTCTCCAATGGTCAAGTGGCTTTTGTTCTTTCACCTACTTCTCTGCAGGTCCCTGTGTTGTATTTCGCTCTGTTGTCTCTCGGCGTTATTGTCTCTCCGGCTAATCCAACTGCTTCCGATTCGGAGATTGCTCATCAGGTTCAACTCAGTAAACCGGTCCTTGCTTTCGCTACGTCCTCAACGGCGTCCAAGCTCCCGCGGCTTCAACTCGGCACCGTCCTGATCGATTCCCCTGAGTTTCTCTCTTTGATGACCGGAAGCAATCGATCTGATGGAAGAGACGATGGCGGCGTCGCCGATGTCGAAGTCAATCAATCTGACTCGGCGACGATTCTCTACTCGTCGGGCACTACCGGACGAGTGAAAGGCGTCATACTAACTCACCGGAACCTCATTGTGGTGAACTCTGCGCCTCGTGGTCTCCACCCTATGGTCGACCAAGGAGAGATGGAGCCACATCCCGCCTCTCTGTGTCTGTTACCTCTGTTCCATGTTTACGGCTTCGTCATGTTGATTCGAGCGATTGCACGAGGCGAAACCTTGGTTCTGATGCACAGATTCCATTTCGAGGAGATGTTAAGAGCAGTGGAGAAGTATAAGGTCATGTACATCCCGGTTTCTCCGCCGCTGGTGGTGGCGTTGGCTAAGTCGGAGCTGGCGGCGAAGTACGACCTCAGTTCTCTTCAAATTTTGGGATGCGGCGGCGCACCCCTTGCGAAAGAAATCATCGACAAATTCCATGAGAAGTTCCCCAACGTGGAAATTGTACAGGGATATGGCCTGACAGAGAGTACAGCAGGGGCATCGAGGACTCTGGGGCCTGAGGAATCCAATAATACAAGTTCAGTAGGTCGCTTATCTGAAAGTATGGAAGCCAAGATAGTGGATCCTGCGTCTGGAGAGGCTTTACCTCCTGGTCACAGAGGAGAGCTTTGGCTGCGAGGGCCAGGAATCATGAAAGGTTATGTTGGAGATGACAAGGCAGCTGCTGAAACCTTGCATCCGGAGGGATGGCTAAAGACTGGTGATCTTTGCTGTTTTGATTCTGATGGATACCTCTACATTGTTGACAGATTAAAAGAATTGATCAAGTACAAAGCTTATCAGGTCCCTCCTGCTGAACTGGAACATTTGCTCCAATCCAACCCCGAGATCATTGACGCTGCTGTGATACCCTATCCTGATGAAGAAGCTGGAGAGATTCCTATGGCTTATGTGGTTAGAAAGCCTGGAAGCAATATCACTGAGGCCCAAGTCATTGATTTCATTGCAAAACAGGCATGTGCACCGTACAAGAAAATTCGACGAGTGTCTTTTATCAACGCAATCCCGAAATCGCCTTCAGGGAAGATTCTTAGGAGGGAGCTTGTCAAACATGCCCTCTCTCAAGGTTCTAATAAATTG 3399 50.4 AAHFVDPRSGFCPQTKIFHSLRPPLSLPPIPQPLSITDHALSLVQSSPPPANTTALVDFDSGVHVSYALLLREIRNLSANLKALTSLSSGQVAFILAPTSLQVPVLYFALLSIGVTISPANPTGSESEIAHQVQLSKPVIAFATSSTAAKLPRKLGKILIDSPEFLSMMTESNRSDGVADVKINQTDSAAILYSSGTTGRVKGVFLSHRNLIAANSTLASLVEQGEIEPRTVSLFLLPLFHVFGFYMMIRGISRGDTLVLMQRFDFEGMLRAVEKYMVTYIPVSPPLVLALAKSEQVAKYDLSSLQFLGCGGAPLGKEVVEKFQEKFPNVEIIQGYGLTESTAAAARTLGPEECSNTSSVGRLSESMEAKIVDPASGEALPPGHRGELWLRGPGIMKGYVEDDKATAETLHPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELELLLQSNPEIIDAAVIPYPDEEAGEIPMAYVVRKPGSNISEDQVIDFIAKQAYSNSTNFILQVAPYKKIRRVSFINAIPKSPAGKILRRELVSHALSQGSNKLLPCVGIWFARPSSTSMADRNPNFNAAHFVDPRSGFCSQTKIFHSLRPPLSLPPTSQPLSITEHALSLLQSSPPPANASALVDSSSGVHVPYALFLRQIQNLASNLRALTSLSNGQVAFVLSPTSLQVPVLYFALLSLGVIVSPANPTASDSEIAHQVQLSKPVLAFATSSTASKLPRLQLGTVLIDSPEFLSLMTGSNRSDGRDDGGVADVEVNQSDSATILYSSGTTGRVKGVILTHRNLIVVNSAPRGLHPMVDQGEMEPHPASLCLLPLFHVYGFVMLIRAIARGETLVLMHRFHFEEMLRAVEKYKVMYIPVSPPLVVALAKSELAAKYDLSSLQILGCGGAPLAKEIIDKFHEKFPNVEIVQGYGLTESTAGASRTLGPEESNNTSSVGRLSESMEAKIVDPASGEALPPGHRGELWLRGPGIMKGYVGDDKAAAETLHPEGWLKTGDLCCFDSDGYLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIIDAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQVIDFIAKQACAPYKKIRRVSFINAIPKSPSGKILRRELVKHALSQGSNKL 1133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16257824 16267216 + MC03g0970 Mch3g1363 684266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1363 1133 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Mch3g1363 1133 Pfam AMP-binding enzyme 631 987 IPR000873 -
Mch3g1363 1133 Pfam AMP-binding enzyme 50 399 IPR000873 -
Mch3g1363 1133 Gene3D - 438 549 IPR045851 -
Mch3g1363 1133 Gene3D - 1026 1128 IPR045851 -
Mch3g1363 1133 Gene3D - 20 437 IPR042099 -
Mch3g1363 1133 Gene3D - 602 1025 IPR042099 -
Mch3g1363 1133 FunFam 4-coumarate--CoA ligase 2 1026 1128 - -
Mch3g1363 1133 Coils Coil 67 87 - -
Mch3g1363 1133 SUPERFAMILY Acetyl-CoA synthetase-like 631 1128 - -
Mch3g1363 1133 CDD 4CL 607 1121 - -
Mch3g1363 1133 FunFam Long-chain-fatty-acid--CoA ligase FadD 601 1025 - -
Mch3g1363 1133 Pfam AMP-binding enzyme C-terminal domain 451 537 IPR025110 -
Mch3g1363 1133 Pfam AMP-binding enzyme C-terminal domain 1039 1115 IPR025110 -
Mch3g1363 1133 SUPERFAMILY Acetyl-CoA synthetase-like 51 550 - -
Mch3g1363 1133 ProSitePatterns Putative AMP-binding domain signature. 776 787 IPR020845 -
Mch3g1363 1133 FunFam Long-chain-fatty-acid--CoA ligase FadD 24 437 - -
Mch3g1363 1133 CDD 4CL 30 543 - -
Mch3g1363 1133 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 590 1121 - GO:0016405(PANTHER)
Mch3g1363 1133 MobiDBLite consensus disorder prediction 931 950 - -
Mch3g1363 1133 FunFam 4-coumarate--CoA ligase 2 438 550 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0071 Mch-Chr11:451915 Mch3g1363 Mch-Chr3:16257824 9.35E-157 dispersed
Mch3g1363 Mch-Chr3:16257824 Mch9g1823 Mch-Chr9:20021828 1.19E-128 dispersed
Mch8g1325 Mch-Chr8:9752578 Mch3g1363 Mch-Chr3:16257824 2.44E-09 dispersed
Mch3g1363 Mch-Chr3:16257824 Mch3g1364 Mch-Chr3:16269288 3.59e-318 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1363 K01904 - csv:101213796 861.292