Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1364 ATGGCTGATCGGAATCCAAACTTCACCGCCGCCCATTCTGTTGATCCCCGAAGCGGTTTCTGCCCTCAAACCAAGATTTTCCACAGCCTCCGACCACCACTCTCACTTCCACCCATTCCTCAGCCTCTTTCCGTTATCGAACACGCCCTCACTCTCCTCCAATCATCCCCTCCTCCCGCAAACACCTCCGTTCTCGTCGACTCCAACTCCGGCGTCCGTGTCTCATACTCTCTTTTCATCCGCCAAATCCGAAACCTCGCCTCTAATCTTCAAGCTCTCACCTCCCTCTCCAATGGTCAAGTGGCTTTCATTCTTGCACCTACTTCTCTGCAGGTCCCTGTGTTGTTGTTCGCTCTCTTGTCTCTCGGTGTCACTATCTCTCCAGCTAACCCTACTGGTTCTCACTCCGAGATTGCTCACCAGGTTCGACTCAGTAAACCGGTCATTGCCTTCGCTACGTCCTCGACGGCGCCCAAGCTCCCGAGGGAGCTTGCCAAGATTCTGATAGATTCGCCGGAGTTCTTCTCTATGATTATCGAAAGCAAGCGATCGGGTGGAGTTGATGATGGCGTCGCCCAGGTCAAAACCAATCAATCCGATTCGGCGGCGATTCTGTACTCGTCTGGCACTACAGGGCAAGTGAAAGGCGTATTACTGACTCACCGGAATTTGGTTGCGGCAAACGCTGTGGCTCATGGTTTCCAGTTGATGGTCAGCTCAAAAGAGAAGGAGCGACATCCTGTCTTCTTGTGTCTGTTACCTCTGTTCCATGTTTTCGGATTCATCATGTTGATTCGAGCAATTTCACGAGGCGATACTGTGGTTCTGATGCAGAAATTCGACTTCGGGGGGATGTTAAGAGCTGTGGAGAAGTATATGGTCACGTACATATCGGTTGCTCCGCCGCTCGTGGTGGCGTTGGCCAAGTCTGAGCTGAAGGTGAAGTACGACCTCAGTTCTCTTCGAATTTTGGGATGCGGCGGCGCTCCTCTTGGGAGAGAAATCATCGAGAAATTCCATGAGAAGTTCCCCAACGTAGAAATTACACAGGGATATGGCTTGACAGAGAGTACAGCAGGCGCATCAAGGACTTTGGGGTCTGAGGAATCCAGTAACACAAGTTCAGTAGGTCGCCTATGTGAAAGTATGGAAGCCAAGATAGTGGATCCTGCATCTGGAGAGGCCTTATCTCCTGGCCACAAAGGAGAGCTTTGGCTGCGAGGACCAGGAATCATGAAAGGTTATGTTGGAGATGACAAGGCAACTGCTGAAACCTTGCATCCGGAGGGATGGCTAAGGACTGGTGATCTTTGCTATTTTGATTCTGATGGATTCCTCTACATTGTTGACAGATTAAAAGAATTGATCAAGTACAAGGCTTATCAGGTCCCTCCTGCTGAACTGGAACATTTGCTCCAATCCAACCCCGAGATCGTTGACGCTGCTGTGATACCCTATCCTGATGAAGAAGCTGGAGAGATTCCTATGGCTTATGTGGTTAGAAAGCCTGGAAGCAATATCACTGAGGCCCAAGTCATTGATTTCGTTGCAAAACAGGTTGCACCATACAAAAAAATTCGGCGAGCGTCTTTTATCAACGCAGTCCCAAAATCACCTTCAGGGAAGATTCTTAGGAGGGAGCTTGTCAAACATGCCCTCTCTCATGGTTCTCATAAGTTGTAA 1683 49.73 MADRNPNFTAAHSVDPRSGFCPQTKIFHSLRPPLSLPPIPQPLSVIEHALTLLQSSPPPANTSVLVDSNSGVRVSYSLFIRQIRNLASNLQALTSLSNGQVAFILAPTSLQVPVLLFALLSLGVTISPANPTGSHSEIAHQVRLSKPVIAFATSSTAPKLPRELAKILIDSPEFFSMIIESKRSGGVDDGVAQVKTNQSDSAAILYSSGTTGQVKGVLLTHRNLVAANAVAHGFQLMVSSKEKERHPVFLCLLPLFHVFGFIMLIRAISRGDTVVLMQKFDFGGMLRAVEKYMVTYISVAPPLVVALAKSELKVKYDLSSLRILGCGGAPLGREIIEKFHEKFPNVEITQGYGLTESTAGASRTLGSEESSNTSSVGRLCESMEAKIVDPASGEALSPGHKGELWLRGPGIMKGYVGDDKATAETLHPEGWLRTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIVDAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQVIDFVAKQVAPYKKIRRASFINAVPKSPSGKILRRELVKHALSHGSHKL 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16269288 16273167 + MC03g_new0394 Mch3g1364 684267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1364 560 Pfam AMP-binding enzyme 61 415 IPR000873 -
Mch3g1364 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 548 - GO:0016405(PANTHER)
Mch3g1364 560 SUPERFAMILY Acetyl-CoA synthetase-like 67 554 - -
Mch3g1364 560 CDD 4CL 39 548 - -
Mch3g1364 560 Gene3D - 33 453 IPR042099 -
Mch3g1364 560 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Mch3g1364 560 Gene3D - 454 554 IPR045851 -
Mch3g1364 560 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Mch3g1364 560 FunFam 4-coumarate--CoA ligase 2 454 555 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1364 Mch-Chr3:16269288 Mch9g1823 Mch-Chr9:20021828 9.03E-133 dispersed
Mch3g1363 Mch-Chr3:16257824 Mch3g1364 Mch-Chr3:16269288 3.59e-318 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1364 K01904 - csv:101213796 850.506