Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g1414 | ATGTCTCAGGAATTGTCATTGGATCAAGACCTGGACGAATCTGATCCCGAGTTCGTGGAGATTGATCCTACTGGTCGATATGGACGGTATAAGGAAATTTTAGGAAAAGGGGCGTACAAAAAAGTATATCGGGCTTTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGATTAAGGTAACAGATGTATTGCGGAACTCTGAAGATTTGGAGCGACTCTATTCAGAAGTTCATTTGCTCAAGACATTGAAGCACAAGAACATAATCAAATTTTACAATTCATGGGTTGATACGAAAAATGAAAACATCAACTTCATTACCGAGATATTCACTTCAGGGACACTACGGCAATATAGAAAGAAACACAAGCATGTTGATTTGAGGGCTCTGAAAAAGTGGTCCAGGCAGATATTAGAGGGCCTTCTGTATCTTCATAGTCATGACCCTCCAGTTATACATAGAGATTTAAAATGTGACAATATCTTTGTCAATGGCAACCAAGGTGAGGTGAAAATCGGTGACCTGGGACTTGCTGCCATTCTTCAGCAGGCTCGTTCGGCTCACAGTGTTATTGGGACACCGGAGTTTATGGCGCCAGAGCTGTACGAGGAGGAATATAATGAGCTTGTGGATATTTATGCCTTCGGCATGTGTTTGCTTGAGCTTGTAACCTTTGAATATCCATATGTCGAATGTGCAAATGCTGCTCAAATATATAAGAAGGTCTCATCAGGGATAAAGCCAGCTTCTTTGGCAAAAGTCACCAATCCTGGAGTTAAAGCACTTATAGAAAAATGTATTGCAAATGTCTCTGACCGCCTACCTGCAAAAGACCTTTTAAGGGATCCATTTCTCCTAGCAGATGATGATCATGAAAGAATAACTCGTCACTTAAAAAACAAGACACAACACACAGAAGAAAAGAGAGAGCAGCTCCATATCGATAGATGTACAGATGATACTTCTGCTGAGACTACCAGAGACTTCAGCATGCATGGTCAGAGAAAAGATGTTAACAAGATATTTCTCAAATTACGAATTGCTGACGCCTTGGGTAATGTCCGCAACATCCATTTCCCATTTGATATTGAAGCCGACACAGCAATTTCTGTTGCAAGTGAAATGGTCGAGGAATTGGACCTTTCAGATCAAGATGTCTCCACAATTTCTGAAATGATCGAAACTGAAATCCGGTCCTACATTCCAGACTGGACATCAGTTGAGTATGGTGTAGATAATGTAGGGGGAGATGTTGCAATTTCTGATAGCTCTCCATCTGAAACGAGGAATGGTGCCTCTCCCTTGTCTATTGAATCTGGTAACCTTGCATTAGAGATAATGCCTTCAGGTCGTAAGTACTGGTCTGACTCTCCAAAGGGAATTGGTGGGTGCTCTCCTGTTAAGCCAGGTCCTTCAAACTTGTCTTGTATGGATCAGAATGTTGAATCTTCTGGCAGCCACATGCCTAGGGATAATCTAGATCATGCTGCTATAATTAAGGGACTGGAAAGTGAGCTTTTGTCTGATTATGGCGGTAATGGCGGGCAGGATGAGGGTAGCTCAACTACAAATCTTCATGCTAGCTCTGATGCACACCCTTCAGAAGAGAACTGTGGAGTTTCAGAACGTGATGAATCAGAATTCATCGAGGTAATGGCTGAAAAACTTGATAAACTGTTGATACAGCAGCAAAAGGAATTAGATGAGCTAAAGAGGGAGCATAAATTAGTTATTTCAGAACTTTTGAGTGAACTTACACCTGAGTCCTATGAGAAGGTTTTAAGGATATGCAAGCTAGAGCCTTCTGATTATGACTCGGGTCTCTGA | 1830 | 41.58 | MSQELSLDQDLDESDPEFVEIDPTGRYGRYKEILGKGAYKKVYRAFDELEGIEVAWNQIKVTDVLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIYKKVSSGIKPASLAKVTNPGVKALIEKCIANVSDRLPAKDLLRDPFLLADDDHERITRHLKNKTQHTEEKREQLHIDRCTDDTSAETTRDFSMHGQRKDVNKIFLKLRIADALGNVRNIHFPFDIEADTAISVASEMVEELDLSDQDVSTISEMIETEIRSYIPDWTSVEYGVDNVGGDVAISDSSPSETRNGASPLSIESGNLALEIMPSGRKYWSDSPKGIGGCSPVKPGPSNLSCMDQNVESSGSHMPRDNLDHAAIIKGLESELLSDYGGNGGQDEGSSTTNLHASSDAHPSEENCGVSERDESEFIEVMAEKLDKLLIQQQKELDELKREHKLVISELLSELTPESYEKVLRICKLEPSDYDSGL | 609 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 16598092 | 16604566 | + | MC03g1006 | Mch3g1414 | 684317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g1414 | 609 | CDD | STKc_WNK | 26 | 286 | - | - | |
Mch3g1414 | 609 | FunFam | probable serine/threonine-protein kinase WNK9 | 111 | 291 | - | - | |
Mch3g1414 | 609 | MobiDBLite | consensus disorder prediction | 509 | 541 | - | - | |
Mch3g1414 | 609 | FunFam | Probable serine/threonine-protein kinase WNK1 | 12 | 109 | - | - | |
Mch3g1414 | 609 | SUPERFAMILY | Protein kinase-like (PK-like) | 30 | 287 | IPR011009 | - | |
Mch3g1414 | 609 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 13 | 565 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Mch3g1414 | 609 | Coils | Coil | 554 | 581 | - | - | |
Mch3g1414 | 609 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 293 | - | - | |
Mch3g1414 | 609 | MobiDBLite | consensus disorder prediction | 515 | 536 | - | - | |
Mch3g1414 | 609 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 344 | 398 | IPR024678 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Mch3g1414 | 609 | ProSiteProfiles | Protein kinase domain profile. | 28 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch3g1414 | 609 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 152 | 164 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch3g1414 | 609 | Gene3D | - | 340 | 410 | - | - | |
Mch3g1414 | 609 | MobiDBLite | consensus disorder prediction | 301 | 332 | - | - | |
Mch3g1414 | 609 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 109 | - | - | |
Mch3g1414 | 609 | SMART | serkin_6 | 28 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch3g1414 | 609 | Pfam | Protein kinase domain | 31 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0481 | Mch-Chr2:3481067 | Mch3g1414 | Mch-Chr3:16598092 | 1.13E-120 | dispersed | |
Mch3g1414 | Mch-Chr3:16598092 | Mch8g2922 | Mch-Chr8:31967533 | 1.39E-157 | dispersed | |
Mch3g1414 | Mch-Chr3:16598092 | Mch7g1064 | Mch-Chr7:14680084 | 5.33E-164 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77280 | PF00069 | Pkinase | 1.30E-50 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch3g1414 | K08867 | - | csv:101206177 | 1007.28 |