Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1524 ATGCGGATAACTTCGCCAGGTTTATCTCAGTTTTTGTATCGACAGACACGATTTTTCCGCACATCCGCCAGCCTCCGCTGTGAATTTCCTTGGGAACGTCCTTTTGATTTTTCAACGGTAGAAGCAGTAGATAAAATTTCAGGCTCTAAGCCAGCAGAAGTGTCCAACTTGGTGCAGGGTAGATGGATTGGATCTTCAAGTTGGAATACTATTCTGGATCCTTTAAATGGAGAACCATTCATCAAAGTTGCCGACGTGAATGAAACAGAAATTGATCCATTTGTGGACAGCCTGTCCAAATGCCCAAAGCATGGCTTACACAATCCTTTCAAATCGCCTGAGAGATATCTTTTGTATGGAGATGTATCTTCTCGGGCTGCTACATTGCTCTCCATGACTGGGGTGTCTGACTTCTTCGCTAGGTTGATTCAAAGAGTTTCTCCGAAAAGTTATCAACAAGCTCTTGCTGAAGTAAAGGTTACTGCAAAGTTTCTAAAGAACTTCTCTGGCGATCAGGTTCGCTTCTTGGCAAGGTCTTTTGCAGTACCTGGAGATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCCTATGGTCCTGTTGCAATCATCACTCCTTTTAACTTCCCCCTAGAAATTCCACTACTTCAGCTGATGGGTGCACTTTACATGGGCAACAAACCCGTTTTGAAAGTTGATAGCAAGGTGAGCATAGTTATGGAGCAAATGATTCGATTGCTTCACCATTGTGGCCTACCTCTGGAAGACTTAGATTTTATAAATTGTGATGGGAAGACAATGAACAAGTTACTGATTGAGGCAAATCCATCGATGACTCTTTTCACTGGTAGCTCAAGGGTGGCAGATAAGTTGGCCGTTGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGATTTGACTGGAAAATCTTAGGGCCAGACGTTCAAGAGGAGGATTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGTAGCGGTCAGAAGTGCTCGGCACAATCAATACTGTTCATGCATGAGAACTGGTCTACAACTTCACTTATTTCAAAGATAAAGAATCTTGCAGAGAGAAGGAAATTGACAGATTTGACAATTGGCCCAGTTCTTACGGTTACTAACGAAGTGATGTTGGATCACATGAATAAATTGCTCAAGATACCTGGGTCAAAGTTACTCTTTGGAGGTGAACCTCTTAAAAATCATTCCATTCCACCTATATATGGTGCTCTGAAACCCACCGCAGTGTATATTCCACTAGAAGAGATGATGAAAGATGGCAATTCCGAGCTTGTGACTAAAGAAATTTTTGGACCATTCCAGATTATTACTGAATATAAGAGAAATCAACTTTCAGTAGTGTTGGATGCTCTTGAGCGGATGCATGCTCATCTAACGGCAGCTGTTGTTTCAAATGACCCTCTTTTTCTGCAGGAAGTTATCGGAAATACTGTGAATGGAACGACATATGCTGGTTTGCGAGCGAGAACAACTGGAGCTCCGCAGAACCACTGGTTTGGACCAGCTGGAGACCCCAGAGGTGCAGGTATCGGGACTCCAGAAGCGATCAAACTCGTTTGGTCTTGCCATAGGGAGATCATATATGACATTGGCCGCTTGCCATTGAATTGGGCAACCCCACAAGCAACTTAA 1671 43.33 MRITSPGLSQFLYRQTRFFRTSASLRCEFPWERPFDFSTVEAVDKISGSKPAEVSNLVQGRWIGSSSWNTILDPLNGEPFIKVADVNETEIDPFVDSLSKCPKHGLHNPFKSPERYLLYGDVSSRAATLLSMTGVSDFFARLIQRVSPKSYQQALAEVKVTAKFLKNFSGDQVRFLARSFAVPGDHLGQQSHGFRWPYGPVAIITPFNFPLEIPLLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKLLIEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKILGPDVQEEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSTTSLISKIKNLAERRKLTDLTIGPVLTVTNEVMLDHMNKLLKIPGSKLLFGGEPLKNHSIPPIYGALKPTAVYIPLEEMMKDGNSELVTKEIFGPFQIITEYKRNQLSVVLDALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGRLPLNWATPQAT 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17341473 17347456 - MC03g1111 Mch3g1524 684427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1524 556 FunFam probable aldehyde dehydrogenase 47 305 - -
Mch3g1524 556 FunFam Aldehyde dehydrogenase 12 313 501 - -
Mch3g1524 556 Pfam Aldehyde dehydrogenase family 71 497 IPR015590 GO:0016491(InterPro)
Mch3g1524 556 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620(InterPro)
Mch3g1524 556 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 46 305 IPR016162 GO:0016491(InterPro)
Mch3g1524 556 SUPERFAMILY ALDH-like 54 524 IPR016161 GO:0016491(InterPro)
Mch3g1524 556 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491(InterPro)
Mch3g1524 556 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 49 551 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1524 K00294 - csv:101214440 967.992