Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1585 GGATCAGGTGAGGGAGGGCGTTCGTCATCCCTTATGGAGAGTTTATTGGGTCTTCTTCGGATTCGGATAATCCGCGGCGTGAACCTGGCGGTTCGCGACGTTCGCAGCAGCGACCCTTACATCGTGGTCAAGCTGGCGAACCAGAAACTGAAGACGCGCGTGATAAAAAAGGACATCAACCCGGAATGGAACGAGGACCTAACTCTTTCCGTGACGGACCCCAACGTGTCCGTGAAGTTGACCGTGTACGACCACGACACGTTTAGCATGGACGACAAGATGGGGGACGCAGAATTCGAGATAGGGCCCTACATAGAAGCCTTGAAGATGAATTTGGAAGGCCTACCCAGCGGCACCATCGTCTCCAAACTGCAGCCCAGCAGGCAGAATTGCCTTGCCGAGGAGAGCCCCATTCTGTGGCAGGACGGCAAGGTTGTCCAGAACATCTGCCTCCGCCTCCGCAACGTCGAGTGCGGCGAAGTCGAGATCCAGTTGCAATGGATCGACCTTCCCGGTTCCAAAGCTGCGTTGGTCACGTGCATGTCAGCACTGACGTCGTCGGAGGTGAGTGACGACAGTTGTATTGAAACGACAACGATGAGGAGGAGGAGGACGTCGAGTAATAAGGATGTGGATAATCCATACGACAGGGCCGCAAGTGCAAAACCGAAACCAAAGAGGGCGCTTTGGACGTCCGTGTGGCGGCTCCCTGGCATGGTTCAGTATTTAAATCGCTTCAAGTCTACAATTCTTCTCCATCATTGTTTGTATAAGAGA 777 53.93 GSGEGGRSSSLMESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKLANQKLKTRVIKKDINPEWNEDLTLSVTDPNVSVKLTVYDHDTFSMDDKMGDAEFEIGPYIEALKMNLEGLPSGTIVSKLQPSRQNCLAEESPILWQDGKVVQNICLRLRNVECGEVEIQLQWIDLPGSKAALVTCMSALTSSEVSDDSCIETTTMRRRRTSSNKDVDNPYDRAASAKPKPKRALWTSVWRLPGMVQYLNRFKSTILLHHCLYKR 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17807303 17808359 - MC03g1167 Mch3g1585 684488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1585 259 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
Mch3g1585 259 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 12 174 IPR044562 -
Mch3g1585 259 Pfam C2 domain 17 103 IPR000008 -
Mch3g1585 259 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 17 150 IPR035892 -
Mch3g1585 259 SMART C2_3c 18 113 IPR000008 -
Mch3g1585 259 MobiDBLite consensus disorder prediction 200 220 - -
Mch3g1585 259 CDD C2_ArfGAP 16 159 - -
Mch3g1585 259 Gene3D C2 domain 13 176 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g2092 Mch-Chr1:20297906 Mch3g1585 Mch-Chr3:17807303 6.06E-41 dispersed
Mch3g1585 Mch-Chr3:17807303 Mch4g1416 Mch-Chr4:17631385 1.04E-70 dispersed
Mch8g2285 Mch-Chr8:25933817 Mch3g1585 Mch-Chr3:17807303 2.99E-80 transposed
Mch3g1585 Mch-Chr3:17807303 Mch6g0426 Mch-Chr6:2834751 6.19E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1585 - - - 0.0