Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch3g1585 | GGATCAGGTGAGGGAGGGCGTTCGTCATCCCTTATGGAGAGTTTATTGGGTCTTCTTCGGATTCGGATAATCCGCGGCGTGAACCTGGCGGTTCGCGACGTTCGCAGCAGCGACCCTTACATCGTGGTCAAGCTGGCGAACCAGAAACTGAAGACGCGCGTGATAAAAAAGGACATCAACCCGGAATGGAACGAGGACCTAACTCTTTCCGTGACGGACCCCAACGTGTCCGTGAAGTTGACCGTGTACGACCACGACACGTTTAGCATGGACGACAAGATGGGGGACGCAGAATTCGAGATAGGGCCCTACATAGAAGCCTTGAAGATGAATTTGGAAGGCCTACCCAGCGGCACCATCGTCTCCAAACTGCAGCCCAGCAGGCAGAATTGCCTTGCCGAGGAGAGCCCCATTCTGTGGCAGGACGGCAAGGTTGTCCAGAACATCTGCCTCCGCCTCCGCAACGTCGAGTGCGGCGAAGTCGAGATCCAGTTGCAATGGATCGACCTTCCCGGTTCCAAAGCTGCGTTGGTCACGTGCATGTCAGCACTGACGTCGTCGGAGGTGAGTGACGACAGTTGTATTGAAACGACAACGATGAGGAGGAGGAGGACGTCGAGTAATAAGGATGTGGATAATCCATACGACAGGGCCGCAAGTGCAAAACCGAAACCAAAGAGGGCGCTTTGGACGTCCGTGTGGCGGCTCCCTGGCATGGTTCAGTATTTAAATCGCTTCAAGTCTACAATTCTTCTCCATCATTGTTTGTATAAGAGA | 777 | 53.93 | GSGEGGRSSSLMESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKLANQKLKTRVIKKDINPEWNEDLTLSVTDPNVSVKLTVYDHDTFSMDDKMGDAEFEIGPYIEALKMNLEGLPSGTIVSKLQPSRQNCLAEESPILWQDGKVVQNICLRLRNVECGEVEIQLQWIDLPGSKAALVTCMSALTSSEVSDDSCIETTTMRRRRTSSNKDVDNPYDRAASAKPKPKRALWTSVWRLPGMVQYLNRFKSTILLHHCLYKR | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 17807303 | 17808359 | - | MC03g1167 | Mch3g1585 | 684488 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch3g1585 | 259 | ProSiteProfiles | C2 domain profile. | 1 | 117 | IPR000008 | - | |
Mch3g1585 | 259 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 12 | 174 | IPR044562 | - | |
Mch3g1585 | 259 | Pfam | C2 domain | 17 | 103 | IPR000008 | - | |
Mch3g1585 | 259 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 17 | 150 | IPR035892 | - | |
Mch3g1585 | 259 | SMART | C2_3c | 18 | 113 | IPR000008 | - | |
Mch3g1585 | 259 | MobiDBLite | consensus disorder prediction | 200 | 220 | - | - | |
Mch3g1585 | 259 | CDD | C2_ArfGAP | 16 | 159 | - | - | |
Mch3g1585 | 259 | Gene3D | C2 domain | 13 | 176 | IPR035892 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g2092 | Mch-Chr1:20297906 | Mch3g1585 | Mch-Chr3:17807303 | 6.06E-41 | dispersed | |
Mch3g1585 | Mch-Chr3:17807303 | Mch4g1416 | Mch-Chr4:17631385 | 1.04E-70 | dispersed | |
Mch8g2285 | Mch-Chr8:25933817 | Mch3g1585 | Mch-Chr3:17807303 | 2.99E-80 | transposed | |
Mch3g1585 | Mch-Chr3:17807303 | Mch6g0426 | Mch-Chr6:2834751 | 6.19E-87 | wgd |
Pathway information
