Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1615 TGCGGAAATTTGGTAAACATCTCCTATCCTTTTTGGGGAAACGAGCGGCAGGACTTTTGCGGGCGGCGAGAATTCGTGCTCAACTGCAAACAAAACCTAACCACCACGATTCAGATCAATTCTCTGGAATATAAGGTTCTCCACATCAATCAAACGGATCATAGAATGACGATCGCGAGATCAGATCTCTTCGATGATTACTGCCCTAAAAATCAAATCGAAACGGCGAAGTTTGATCACCATCTACTCACATATTATTGGTACGATCGGAACATGTCGTTCTGGTACGATTGCCCGCCGCAACAGGGAATTCCGGACGAATTTAGATTCTTTTGCGGGTGGGAAGGGGAAAGAAGTGGAAGAGCGAATTATGCTTTGGAGCCTGAGGAGATGAATTTGAGTGGAAATATAAGAGGGTGTAAAATGAACGTGGAAGTGGCAGTTACGATAGAGGGATTGGAAGAAGGAAAAGAGAACAGAACGGCGCGGCTGGAGAAGGCGCTGCAGCGAGGGTTCGATGTGGAGTACGGGGATTTGCATACCATGGCGTGCGACGTGTGCAAGCAAAGTGGCGGCTATTGCGGAGCAAACGCGACGTACCCATTTTACTGCATTTAATTGGTAAACATAACATATCCCTTCTGGGGGAATGAGAGGCAGGGGTTTTGCGGGCGACGAGAATTCGAGCTAAACTGCAAACGAAACCGAACCACCACGATTCAAATCAATTCATTCGAATACAACGTCCTGAGAATCAACCAATCGGGTCACAGAATGACAATCGCAAGATCAGACCTCCTCGACGATTACTGCCCGAAACACAAACACCAAATCGAAACGGCGACGCTGGATTACCATCTGTTCATGTATTCTTCGAACAATCGGAACGTCTCCGTGTGGTACAATTGCCAGCCGCAAGAGGGAATTCCGGACGATTACAGATTTTGGTGCGGGTGGGAAGGGGAAAGAAATGGGAGTGGGAATAATTATGCCTTTGAAGCGGCGGCGATGAATTTGAGCAGAAATATGAGAGGGTGCGGGATGAAGATCGAAGTGACGGTTACGACAGAAGTATTGAAAGAAGGTTCAAATAACAGGAGGAGATTAGTGGAGAAGGCTGTGAGAGGAGGGTTCGACGTGGAATACGGGAATTTGTATACGGTGGCGTGCAACGATTGCGAGAAAAATGGCGGCAAGTGTGGAGGAAACGGAACGGACCCATTTTACTGCATCTGTGGAAGTGGAGTCTGCGGATCTGATCCGGCTCCTGCCTGCGGTATCAGTTACAATTGCGGAGAATTGGTAAACATAACCTATCCCTTCTGGGGGAATAAGAGGCAGGGGTTTTGCGGGCGGCGAGAATTCGAGCTCAACTGCAAACGAAACCGAACCACCACGATTCAAATCAACTCGTTCGACTACAACGTCCTGAGAATCAACCAAACGGATCACAGAATGACGATCGCAAGATCAGACCTCCTAGTCCCGGGTAACCTATGCCCTAAAAACAAAACCGGAACGGCGAATTTGGACTACAATGTGTTCAGATATTCCGAAAACGATCTCCAAATCTCTCTGTGGTACGATTGCCCGCTGCAAGGGGAGAACGTAGAGAGTTACAGATTTTCTTGCGGGGGGGAAGGAGAGAAGAACGGGAGCGGGAATTACGCATTCGACGCGATGCAGACGATTTGGAGGAATCAATTCGAGGGGAAATGTAGAACGAACGTCGAAGTGAAAGTAAGGAGAGAGGGGTGGGAAGGCGGGAACGGGAAGAACAGAACGGGCGCGGTGGAGAGTGCTCTGAGAGGAGGATTCGACGTGGAGTACGGGAATCTGTACTCGACGGAGTGTGAGGGGTGCAAGGAGAGCGGGGGAAAGTGCGGAGGAAACGGGACGTACCCATTTTACTGCATTTGCGAAAGCCAAGATGCGCAGCCATCCGCCTGTAGAGCTGCGGCTGCTCCTGACGCCATTGATGAATTTAAAGCCTGCGGTCACAGTTACAATTGCGGAGAATTGGTTAACATAGCCTATCCCTTCTGGGGGAATGAGAGGAAAGGGTTTTGCGGGAGGCGAGAATTCGAACTCAAATGCAAACACAATCGAACCACCACCATTCAAATCAATTCTCTGGAATACAACATTCTGAAAATCAACCAGTCGGATCACAGAATGACGATCGCAAGATCGGACCTATTCGATAATTTATGCCCTAAAAATCAAACCCAAACGGCGACTCTGGATCACCATCTGTTCGTGTATTCCTCGAACGATCAGAACATCTCCGTGCGGTACAATTGCTCGGCGCAAAAGGAAATTCCGGAGACGTACAAATTTAGTTGCGGTTCGGAAGAGGAGAAGAATGGGAGAGCGAATTATGCTTTCGAACCGTCGGCGGCGACTTGGAATCTGCTAATCGAGGAGTGTACGATGAACATCGATGTGAAGGTTACGATGGAAGGGTTGAAAGAAGGTTTGAAGAACAGAACGAGATTAGTGGAGAAGGCTGTGAGACGTGGGTTCGATGTGGAATACGGGAATTTGTATACTGTGGCGTGCAACGATTGCGAGAGAAATGGCGGCAATTGCGGAGGAAACGGAACACCTCGATTTCATATTACATACATTATTATTACGTTTGGAAACTCAACAAACTTAACAAGAAAAATGAATGCCATGGCAGGTGTTGGTTGTGGTATTGGAGGCATAATTTTAATGGGTACAATTTCTCTCATCTTGCTGCGCTTGCAGAAGAACAAGCATGCCCATGCTTCTTCCTTTCCCCTTGGAAACAATTATTTTGATCCTCCATCGAAGGAACTTGAGAAAGGAGAAAACTACATGGTTGTACCTCTGTTCTCTTATGGCGAGCTTGAAGAAGCCACAGACAAATTCAATCCAGCCAAAGAACTTGGAGATGGTGGCTTTGGCACCGTCTACTATGGCAAACTTCGAGACGGTCGTGAAGTTGCGGTTAAACGATTGTTCGAAAACAACTACAGGAAAGTTGAACATTTCATGAATGAGGTGAAGATCCTCACTTGTTTGCACCACCAACATCTAGTAACCCTTTATGGATGCACCTCTAGACGCTCTCGTGAACTCCTACTCGTGTATGAGTTCATTCCGAACGGTACTCTAGCCGATCATCTTCATGGAAACCGAGCAAAATCCGGTGAGCTTCCATGGATTACAAGGTTGAAGATTGCCATAGAGACTGCAAGTGCTCTGGCTTATCTCCATGCTTCTAAGACCATCCACCGTGATGTTAAAACCACCAACATTCTTCTTGACAAGAACTTAAGTGTTAAAGTGGCCGATTTAGGATTGTCTTGCCTTTCTCCTACGCAAGCCACCCATGTTTCAACTGCTCCACAAGGAACTCCTGGCTACATCGATCCAGAGTATCAAGAATGTTATCAACTTACTAATAAAAGCGACGTCTTTAGTTTTGGGGTCGTATTGGTTGAGTTGATATCTTCAAAGCCAGCAGTTGATGTCACAAGGCACAGGCATGAGATTAACTTGTGGACAATGGCAATCAACAAGATCCAAAACAACGATCTACACAACTTTGTAGACCCATCTCTTCGATTTGAAACGGATCAAAGTGTGAGAGATATGATATATGCAGTTGCAGGGTTGGCATTTCAATGCCTGCAAAGTGTGAAAGACATGAGGCCGTCGATGTTGGAAGCTTTGGAAATTCTAAAGAATATAGAAAGTCGAAGTTGTGGCAGAAGGAAGACAGAAGAATTAGACATATTAAGCGAAGATGAGCTGAAGGTTGGTTCAGTGCCACAATCCCCGGATTCTGTTACTATGCCTTGGATTAGCAAATCCTCAACACCAAATGGTAGTGGGTAA 3870 46.72 CGNLVNISYPFWGNERQDFCGRREFVLNCKQNLTTTIQINSLEYKVLHINQTDHRMTIARSDLFDDYCPKNQIETAKFDHHLLTYYWYDRNMSFWYDCPPQQGIPDEFRFFCGWEGERSGRANYALEPEEMNLSGNIRGCKMNVEVAVTIEGLEEGKENRTARLEKALQRGFDVEYGDLHTMACDVCKQSGGYCGANATYPFYCILVNITYPFWGNERQGFCGRREFELNCKRNRTTTIQINSFEYNVLRINQSGHRMTIARSDLLDDYCPKHKHQIETATLDYHLFMYSSNNRNVSVWYNCQPQEGIPDDYRFWCGWEGERNGSGNNYAFEAAAMNLSRNMRGCGMKIEVTVTTEVLKEGSNNRRRLVEKAVRGGFDVEYGNLYTVACNDCEKNGGKCGGNGTDPFYCICGSGVCGSDPAPACGISYNCGELVNITYPFWGNKRQGFCGRREFELNCKRNRTTTIQINSFDYNVLRINQTDHRMTIARSDLLVPGNLCPKNKTGTANLDYNVFRYSENDLQISLWYDCPLQGENVESYRFSCGGEGEKNGSGNYAFDAMQTIWRNQFEGKCRTNVEVKVRREGWEGGNGKNRTGAVESALRGGFDVEYGNLYSTECEGCKESGGKCGGNGTYPFYCICESQDAQPSACRAAAAPDAIDEFKACGHSYNCGELVNIAYPFWGNERKGFCGRREFELKCKHNRTTTIQINSLEYNILKINQSDHRMTIARSDLFDNLCPKNQTQTATLDHHLFVYSSNDQNISVRYNCSAQKEIPETYKFSCGSEEEKNGRANYAFEPSAATWNLLIEECTMNIDVKVTMEGLKEGLKNRTRLVEKAVRRGFDVEYGNLYTVACNDCERNGGNCGGNGTPRFHITYIIITFGNSTNLTRKMNAMAGVGCGIGGIILMGTISLILLRLQKNKHAHASSFPLGNNYFDPPSKELEKGENYMVVPLFSYGELEEATDKFNPAKELGDGGFGTVYYGKLRDGREVAVKRLFENNYRKVEHFMNEVKILTCLHHQHLVTLYGCTSRRSRELLLVYEFIPNGTLADHLHGNRAKSGELPWITRLKIAIETASALAYLHASKTIHRDVKTTNILLDKNLSVKVADLGLSCLSPTQATHVSTAPQGTPGYIDPEYQECYQLTNKSDVFSFGVVLVELISSKPAVDVTRHRHEINLWTMAINKIQNNDLHNFVDPSLRFETDQSVRDMIYAVAGLAFQCLQSVKDMRPSMLEALEILKNIESRSCGRRKTEELDILSEDELKVGSVPQSPDSVTMPWISKSSTPNGSG 1288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17992372 18014289 + MC03g1193 Mch3g1615 684518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1615 1288 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 423 645 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Mch3g1615 1288 ProSiteProfiles Protein kinase domain profile. 965 1240 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1615 1288 Coils Coil 150 170 - -
Mch3g1615 1288 Gene3D Transferase(Phosphotransferase) domain 1 1042 1252 - -
Mch3g1615 1288 Gene3D Phosphorylase Kinase; domain 1 937 1041 - -
Mch3g1615 1288 SUPERFAMILY Protein kinase-like (PK-like) 947 1242 IPR011009 -
Mch3g1615 1288 Pfam Protein tyrosine and serine/threonine kinase 968 1234 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1615 1288 SMART serkin_6 965 1236 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1615 1288 MobiDBLite consensus disorder prediction 1264 1288 - -
Mch3g1615 1288 ProSitePatterns Protein kinases ATP-binding region signature. 971 993 IPR017441 GO:0005524(InterPro)
Mch3g1615 1288 Pfam Wall-associated receptor kinase galacturonan-binding 429 489 IPR025287 GO:0030247(InterPro)
Mch3g1615 1288 Pfam Wall-associated receptor kinase galacturonan-binding 664 729 IPR025287 GO:0030247(InterPro)
Mch3g1615 1288 Pfam Wall-associated receptor kinase galacturonan-binding 204 262 IPR025287 GO:0030247(InterPro)
Mch3g1615 1288 Pfam Wall-associated receptor kinase galacturonan-binding 1 60 IPR025287 GO:0030247(InterPro)
Mch3g1615 1288 MobiDBLite consensus disorder prediction 1267 1288 - -
Mch3g1615 1288 FunFam Wall-associated receptor kinase-like 20 1042 1250 - -
Mch3g1615 1288 Pfam Wall-associated receptor kinase C-terminal 329 412 IPR032872 -
Mch3g1615 1288 Pfam Wall-associated receptor kinase C-terminal 123 205 IPR032872 -
Mch3g1615 1288 Pfam Wall-associated receptor kinase C-terminal 543 641 IPR032872 -
Mch3g1615 1288 Pfam Wall-associated receptor kinase C-terminal 787 868 IPR032872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1615 Mch-Chr3:17992372 Mch8g1280 Mch-Chr8:9295705 3.77E-196 dispersed
Mch3g1615 Mch-Chr3:17992372 Mch3g1616 Mch-Chr3:18015595 4.93E-26 tandem
Mch3g1615 Mch-Chr3:17992372 Mch6g0392 Mch-Chr6:2598248 1.01E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77290 PF07714 PK_Tyr_Ser-Thr 2.00E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1615 - - - 0.0