Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch3g1682 | CCATCCAATTTCTCTCTTCTCTCTCACTTCTCTTTCATATCTCTCTCCATTTTCAGGTCTTTTTGTATTTTTTTTATCTCTCTCTTGCTGATCTTGCTCTTGAACTCCATCGATCTCTCAATAATGTCTTTGGAATACGAGTTTCTGTTGGTTCCTTCATCTGGGTTTGGCTCAACAATGGCCAATCTCCATCTCTTGCTTTTCTTTCTTCTCTTTGTCACAGTGTTTGCCCTCTGCCTCAGCCCCGGTGGGCTGGCTTGGGCTCTGATTTCAAGGCCAAGGAACAAACCCATCATTCCTGGGCCTTGTGGCACCCCTTTTCTCGGTCAAGCTTCGGCCTTTACTTCTTCTCTCACCCATAGAGTGCTTGCCAACCTCGCCAACACCTTAAAGGCGAAACCTTTAATGTCATTCTCAGTTGGGTTCACTCGTTTTGTGATCTCCAGCAACCCCATCACTGCCAAAGAGCTCTTGAACAGCTCGGCCTTTGCTGATCGCCCAATTAAGGAGTCGGCTTACGAGCTTTTGTTCCATAGAGCAATGGGTTTTGCTCCCTATGGGGAGTATTGGAGGATTCTTAGGAGAATCTCAGCCACCCATTTGTTTAGTCCTAAGAGAATTTCAAGTTTTGGGGAGCTGAGGGGGATGATTGGGGCTAAAATGGTGGACCAAATTGAGAGTTTGATGGAGAAAAATGGGGAGGTTGAGGTGAGGAAAGTTTTGCATTTTGGGTCGTTGAATAATGTGATGGGGAGTGTGTTTGGGAGAAGTTGCGGATTTGGTGATGAGAGTGAGAGTTGTGAGGTTGAGGGATTGGTGAGTGAAGGGTATGATTTGCTGGGGAGTTTTAATTGGAGTGACCATTTCCCTGTTTTGGAGTGGCTGGATTTGCAAGGGGTGAGAAAAAGGTGCAAAATTTTGGTTGGGAAAGTGAATGTTTTTGTTGGGAAAATCATAGAGGAGCACAGAATGAAGAGAAGGATTGAAGGAAATTATAATGGAAATCATCATGATCAGATCATCAGCTCTGGGGATTTTGTTGATGTGTTGCTTGATTTGGAAAAGGAAAACAAACTCACTGACTCTGATATGATTGCTGTGCTGTGGGAGATGATCTTTAGGGGCACAGACACGGTGGCAATTCTCTTAGAATGGATACTAGCAAGAATGGTTCTTCATCCTCATATCCAAGCCAAAGTCGAATCTGAAATCGAACGAGTGGTTGGAAATAACCGAAATGTTTCAGATTCTGACCTACCAAACCTCCCCTATCTCCATGCAGTTGTGAAAGAAACCCTAAGAGTACACCCACCCGGGCCGCTCCTCTCATGGGCTCGGCTCGCCATCCACGACACCCACATCGGTGACCACTTCGTCCCGGCTGGGACGACCGCCATGGTTAACATGTGGGCAATAACACACGACGACCAGGTCTGGGTCGACCCATTAATATTCAACCCCGAGAGGTTCATGAAAGAGGAGGTGTCCATAATGGGGTCTGATCTTAGACTGGCGCCATTTGGTTCAGGAAGAAGGGTTTGTCCTGGTAAAGCCATGGGGTTAGCCACAGTCGAGCTCTGGCTCGCTCAGTTGCTTCAGAGCTTCAAATGGGAGGTGGGTCCTGAAAATGGAGTCGATTTATCTGAATCTTTGAAGCTCTCCTTGGAAATGAAGAAGCCTTTAATCTGTCAGGCTGTTCCTAGGGCTAAAGCTAAAGCTGGTTGA | 1725 | 46.49 | PSNFSLLSHFSFISLSIFRSFCIFFISLLLILLLNSIDLSIMSLEYEFLLVPSSGFGSTMANLHLLLFFLLFVTVFALCLSPGGLAWALISRPRNKPIIPGPCGTPFLGQASAFTSSLTHRVLANLANTLKAKPLMSFSVGFTRFVISSNPITAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRILRRISATHLFSPKRISSFGELRGMIGAKMVDQIESLMEKNGEVEVRKVLHFGSLNNVMGSVFGRSCGFGDESESCEVEGLVSEGYDLLGSFNWSDHFPVLEWLDLQGVRKRCKILVGKVNVFVGKIIEEHRMKRRIEGNYNGNHHDQIISSGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPHIQAKVESEIERVVGNNRNVSDSDLPNLPYLHAVVKETLRVHPPGPLLSWARLAIHDTHIGDHFVPAGTTAMVNMWAITHDDQVWVDPLIFNPERFMKEEVSIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLLQSFKWEVGPENGVDLSESLKLSLEMKKPLICQAVPRAKAKAG | 574 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 18458228 | 18460688 | - | MC03g1251 | Mch3g1682 | 684585 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch3g1682 | 574 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 507 | 516 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch3g1682 | 574 | PRINTS | E-class P450 group I signature | 514 | 537 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PRINTS | E-class P450 group I signature | 383 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PRINTS | E-class P450 group I signature | 504 | 514 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PRINTS | E-class P450 group I signature | 426 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PRINTS | E-class P450 group I signature | 363 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PRINTS | E-class P450 group I signature | 468 | 492 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | Gene3D | Cytochrome P450 | 88 | 570 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | SUPERFAMILY | Cytochrome P450 | 99 | 568 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | FunFam | Cytochrome P450 78A5 | 91 | 568 | - | - | |
| Mch3g1682 | 574 | CDD | CYP78 | 131 | 561 | - | - | |
| Mch3g1682 | 574 | PRINTS | P450 superfamily signature | 505 | 514 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PRINTS | P450 superfamily signature | 374 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch3g1682 | 574 | PANTHER | CYTOCHROME P450 78A7-RELATED | 48 | 564 | IPR051996 | - | |
| Mch3g1682 | 574 | Pfam | Cytochrome P450 | 100 | 558 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g1826 | Mch-Chr10:17882629 | Mch3g1682 | Mch-Chr3:18458228 | 2.41E-39 | dispersed | |
| Mch3g0495 | Mch-Chr3:8895827 | Mch3g1682 | Mch-Chr3:18458228 | 2.27E-28 | dispersed | |
| Mch3g1682 | Mch-Chr3:18458228 | Mch9g2364 | Mch-Chr9:23584780 | 6.63E-181 | dispersed | |
| Mch5g1258 | Mch-Chr5:12778686 | Mch3g1682 | Mch-Chr3:18458228 | 9.77E-13 | dispersed | |
| Mch3g1682 | Mch-Chr3:18458228 | Mch8g0146 | Mch-Chr8:907537 | 4.47E-243 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch3g1682 | K20619 | - | csv:101203458 | 806.979 |