Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1720 ATGGGGTGTGTGAACTCCAAGCAGACGGTGTCCGTGACGCCTGCATTCGATCACTCCGGCGCGTTTCGGGACAATGAATCTTCGGGTCTGGGGAACTCGGGTCGGAGCCGAATCGGATTGGGGGAGGTTGAGAAGAGTGCGAAGCCCAAGGCCAAGACGAAGACCAAGGGTTCGAGCGAGTTCTGTGGGGTTGGGAGCAAGTTGGGTGAGTCGGGGAGAGCGAGTTCAAATGGAGGAGGGAATGAAACTTTGAGCTTCAGATTGGGGAATTTGCACAAGTATGTCGAAAGTGAGCAAGTGGCGGCCGGGTGGCCGGCCTGGCTCAGCGCCGTCGCCGGTGAAGCCATTCAAGGTTGGGTTCCACTCCGGTCCGATGCCTATGAAAAGTTGGAGAAGATTGGACAAGGTACGTATAGCAGTGTATTCCGAGCACGTGAACTTGAAACGGGGAGGATAGTCGCTTTAAAGAAGGTCCGGTTCGACAATTTTGAGCCTGAAAGTGTTAGATTCATGGCACGAGAGATAATGATTCTCCGCAGGCTTGATCACCCCAACATCATCAAGTTGGAGGGCTTAATCACGTCTCGCTTATCATGTAGCATTTACCTTGTGTTTGAGTACATGGACCACGACATTACTGGACTCTTGTCCTGCCCCGACATTACTTTTAGTGAATCACAGATTAAATGCTACATGAAACAATTGTTATCCGGGCTTGAGCATTGTCACTCACGTGGTGTAATGCATCGGGATATTAAAGGATCTAATCTTCTAGTCAATAATGAAGGGGTATTGAAGGTGGCTGATTTTGGATTGGCAAACTTCTGTAATTCCGGGCACCGGCAACCTCTAACCAGCCGGGTTGTCACTCTATGGTATCGTCCTCCTGAGCTTCTACTGGGCTCAACAGACTATGGTGCCTCTGTGGATCTTTGGAGTGTTGGCTGTGTTTTTGCAGAACTCCTAGTTGGGAAGCCTATCCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCAGATGAATACTGGAAAAAGTCTAAGCTTCCTCATGCCACTTTGTTCAAACCACAACATCCTTATAGTAATTCTCTACGGCAAACCTTCAAAGAGTTTCCTTCGATGACTGTGAACCTGTTGGAAACTCTTCTTTCTGTGGAACCATACAAGCGTGGGGTCGCCTCCACCGCTCTCACATCTGAGTATTTCAGTACAAAACCATATGCCTGCGATCCATCAAGCATGCCAATATATCCACCTAGCAAAGAGATTGATGCAAAACAACGAGAGGAAGCGAGAAGGAAAAAAGGTAGTGGAAGAGTCCGTGGACTAGATAACAGAAGGTCAACACGAAAGCATCTTGGAATCAGTAAATTGGCACCAGCAGAGAACTTATCAGTATCAGCTCGAGATTTGCACAAAATTAGTATCAACGCACAAAATCTTAAAGAAGAAAAGGTTATCAAAGGTGGTGAGGAACAAAAGCTGTCAATTGATAAGCTGGAAGAGACTATACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCCCTTCAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAAAGACGATGCCTCTATTAGATCTCACACCAGATCAATCTCACGAGGACACCTAATGAATGGGTTAGACCATTCTGCTACATTTCATTCAAGAAACAAGTTGGACTCTAAACTTCATGAGAATGGAGACATGTCATTCAGCCGCTCGAGTTCCAAGGGTCATGAATCAAATGAGAGAGCCAAGGTTGTGACATGGAATCGGAATCAGTGGAGCAAGTTTGAGCGTCCCGATTCCTTTGATGCTTCGGATGAGTACCACTCACAGGAGCTCGCGGTGGCACTTTATCTGCGAGATGAAATGGACGCTAAGAGGAGTAATATGAGTTATCAGGACCAAGTGGACAAAGTTGAATATTCTGGGCCCTTGTTATCTCAATCTTGCAGAGTGGATGAACTTTTAGACCGACACGAGAGGCACATCAGACAGACAGTTCGAAGATCATGGTTTCAAAGAGTTAAGAATTGA 2094 46.8 MGCVNSKQTVSVTPAFDHSGAFRDNESSGLGNSGRSRIGLGEVEKSAKPKAKTKTKGSSEFCGVGSKLGESGRASSNGGGNETLSFRLGNLHKYVESEQVAAGWPAWLSAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYSNSLRQTFKEFPSMTVNLLETLLSVEPYKRGVASTALTSEYFSTKPYACDPSSMPIYPPSKEIDAKQREEARRKKGSGRVRGLDNRRSTRKHLGISKLAPAENLSVSARDLHKISINAQNLKEEKVIKGGEEQKLSIDKLEETIHVKNASQGDIPFSGPLQVSTSSGFAWARRRKDDASIRSHTRSISRGHLMNGLDHSATFHSRNKLDSKLHENGDMSFSRSSSKGHESNERAKVVTWNRNQWSKFERPDSFDASDEYHSQELAVALYLRDEMDAKRSNMSYQDQVDKVEYSGPLLSQSCRVDELLDRHERHIRQTVRRSWFQRVKN 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18719533 18724976 + MC03g1288 Mch3g1720 684623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1720 697 MobiDBLite consensus disorder prediction 431 461 - -
Mch3g1720 697 PANTHER CELL DIVISION PROTEIN KINASE 127 411 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Mch3g1720 697 MobiDBLite consensus disorder prediction 41 55 - -
Mch3g1720 697 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524(InterPro)
Mch3g1720 697 FunFam probable serine/threonine-protein kinase At1g54610 114 209 - -
Mch3g1720 697 Gene3D Phosphorylase Kinase; domain 1 114 209 - -
Mch3g1720 697 CDD STKc_CDK9_like 127 411 - -
Mch3g1720 697 MobiDBLite consensus disorder prediction 17 59 - -
Mch3g1720 697 SUPERFAMILY Protein kinase-like (PK-like) 121 417 IPR011009 -
Mch3g1720 697 FunFam probable serine/threonine-protein kinase At1g54610 210 450 - -
Mch3g1720 697 ProSiteProfiles Protein kinase domain profile. 127 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1720 697 MobiDBLite consensus disorder prediction 431 460 - -
Mch3g1720 697 Pfam Protein kinase domain 127 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1720 697 Gene3D Transferase(Phosphotransferase) domain 1 210 450 - -
Mch3g1720 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1720 697 SMART serkin_6 127 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1720 697 MobiDBLite consensus disorder prediction 580 603 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1720 Mch-Chr3:18719533 Mch5g0670 Mch-Chr5:4518006 6.39E-191 dispersed
Mch3g1720 Mch-Chr3:18719533 Mch4g2347 Mch-Chr4:24752181 1.50E-226 wgd
Mch3g1720 Mch-Chr3:18719533 Mch8g0123 Mch-Chr8:720477 7.43E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77295 PF00069 Pkinase 1.80E-68 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1720 - - - 0.0