Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1728 ATGAACCGTACATTTAACCCTTGCCCAGATGAAAATTATGCAAATATTAGGAGATTGATGAGGCAGAGTGAGGACGATCCGAAGAATCTGTTGGACAAGGATCCGCACAGTGATTTCAAGAGCAACCAAGAAGTGAAATGCGGGTTCAGTTCGATTCGAGTAATGGGTATGTTCGTGGTTCTGATGATGTTCATTTCTGTGATCTTTTCGGTGACTGTGGTTCTCAGAGACCCCCCATCGGATGCTGTAATTGAAGTTTCAGATTTGGAGATTTCTCTGGCGAACTCTGATCCAGCAGATTCTAAGGATGGAGATCTTCATTCGGTTATACATCCAGTCGATAAACTGCTCGGTGGCCTTCTTTCTTCCAAACATGGGATGGGTTCGTGTCTGAGTAGGTACAATTCAGTTGCTTATCAACACAAGCTGGCGTACGAACCCTCTTCTTATCTAATCTCCAAATTGCGGAGCTATGAAGATCTTCATAAGCGTTGTGGAGTTTATACTGAATCTTACAACAAAACTTTGGAACAGCTTAGATTTAATGGTAGTAGCAGCTCCTCAGACTGTAAATATCTTCTGTGGATTTCCTTCAGTGGGTTAGGGAATAGAATACTGACCCTTGCTTCGGCATTTCTTTATGCTCTCCTCACAAATCGCGTGTTACTCGTGGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCTGAGGTTTCTTGGTTTCTTCCCCAAGATTTCCCATTAAAAGGTGAGTTCAACAACTTCAACCAGAACTCTCCTAATTGCTATGGGAAAATACTGAAGAATAGCGCAACGACAGACTCGAGTGAAATGATACTGCCATCTGTTGTCTATCTTCATTTGGTCCATGATTATGATGATGTTGATAAGCTTTTTTTCTGTGATCAAGACCAATCTGTTCTGCAGCAATCACCTTGGCTTGTTATGAGAACAGACAACTATTTTGTGCCGTCTCTCTTTTTGATCCCGTCATTCGAGAAAGAACTCGATGAACTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGTTTCACCCCACAAATTCGGTTTGGGGACTCATTACAAGATATTATCAAGCTTATTTGGCTAGAGCAAGTGAGAAAATAGGTATTCAGATTAGAGTGTTCGACATCGGGACTGGACCTTTTCAGCACATCCTGGATCAGGTTCTGGCTTGTACCCTGAAGGAGAATCTGTTGCCAGAAACAAATAAGCAGATGAATATCGTCGGTCCAGCTAGTAATCAGAAGTCAAAGGCCGTGCTGATAACTTCCCTGAGTGCTGGTTACTACGAGAAGTTGAGAGACATTTACTGGGAAAATCCGACTGTGACGGGAGAGAGAATTAGTTTTTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAGAGTATACATAACCAGAAGGCATGGGCAGAGATGTATTTGTTAAGTACCACCGACGTATTGGTCACCAGCTCGTGGTCAACGTTCGGATATGTGGCTCAAGGTCTTAGTGGTCTGAAACCATGGATATTATACAAACCCGAGAATCGTACTGCACCCGATCCGCCTTGTCATCGAGCCATGTCCATGGAGCCCTGTTTCCACGCACCGCCTTTCTACGACTGCAAGGCTAAGAAAGGAACGGACACAGGTAAACTTGTTCCTCATGTGAGGCATTGCGAGGACATGGCCTGGGGGCTTAAGCTGGTTGATCATTATGAT 1752 43.78 MNRTFNPCPDENYANIRRLMRQSEDDPKNLLDKDPHSDFKSNQEVKCGFSSIRVMGMFVVLMMFISVIFSVTVVLRDPPSDAVIEVSDLEISLANSDPADSKDGDLHSVIHPVDKLLGGLLSSKHGMGSCLSRYNSVAYQHKLAYEPSSYLISKLRSYEDLHKRCGVYTESYNKTLEQLRFNGSSSSSDCKYLLWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKGEFNNFNQNSPNCYGKILKNSATTDSSEMILPSVVYLHLVHDYDDVDKLFFCDQDQSVLQQSPWLVMRTDNYFVPSLFLIPSFEKELDELFPNKDTVFHFLGRYLFHPTNSVWGLITRYYQAYLARASEKIGIQIRVFDIGTGPFQHILDQVLACTLKENLLPETNKQMNIVGPASNQKSKAVLITSLSAGYYEKLRDIYWENPTVTGERISFYQPSHEEHQQTEKSIHNQKAWAEMYLLSTTDVLVTSSWSTFGYVAQGLSGLKPWILYKPENRTAPDPPCHRAMSMEPCFHAPPFYDCKAKKGTDTGKLVPHVRHCEDMAWGLKLVDHYD 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18757322 18760325 + MC03g1295 Mch3g1728 684631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1728 584 PANTHER FUCOSYLTRANSFERASE 2-RELATED 47 581 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Mch3g1728 584 Gene3D - 368 537 - -
Mch3g1728 584 Gene3D - 187 240 - -
Mch3g1728 584 Pfam Xyloglucan fucosyltransferase 109 553 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Mch3g1728 584 FunFam Galactoside 2-alpha-L-fucosyltransferase 188 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1728 Mch-Chr3:18757322 Mch9g2109 Mch-Chr9:22017429 7.67E-246 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1728 K13681 - csv:101219153 1040.8